Gene : Tp57577_TGAC_v2_gene4793 T. pratense v2
Defline:  (1 of 2) PTHR23315//PTHR23315:SF80 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  120
Name:  ? Tp57577_TGAC_v2_gene4793 Secondary Identifier:  ? PAC:35974894
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4793 0.5kb upstream 0.5kb upstream 3328 true Tp57577_TGAC_v2_LG6: 756317-759644 Trifolium pratense
Tp57577_TGAC_v2_gene4793 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 759145-759644 Trifolium pratense
Tp57577_TGAC_v2_gene4793 0.5kb downstream 0.5kb downstream 3328 true Tp57577_TGAC_v2_LG6: 755817-759144 Trifolium pratense
Tp57577_TGAC_v2_gene4793 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 755817-756316 Trifolium pratense
Tp57577_TGAC_v2_gene4793 1.0kb upstream 1.0kb upstream 3828 true Tp57577_TGAC_v2_LG6: 756317-760144 Trifolium pratense
Tp57577_TGAC_v2_gene4793 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 759145-760144 Trifolium pratense
Tp57577_TGAC_v2_gene4793 1.0kb downstream 1.0kb downstream 3828 true Tp57577_TGAC_v2_LG6: 755317-759144 Trifolium pratense
Tp57577_TGAC_v2_gene4793 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 755317-756316 Trifolium pratense
Tp57577_TGAC_v2_gene4793 2.0kb upstream 2.0kb upstream 4828 true Tp57577_TGAC_v2_LG6: 756317-761144 Trifolium pratense
Tp57577_TGAC_v2_gene4793 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 759145-761144 Trifolium pratense
Tp57577_TGAC_v2_gene4793 2.0kb downstream 2.0kb downstream 4828 true Tp57577_TGAC_v2_LG6: 754317-759144 Trifolium pratense
Tp57577_TGAC_v2_gene4793 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 754317-756316 Trifolium pratense
Tp57577_TGAC_v2_gene4793 5.0kb upstream 5.0kb upstream 7828 true Tp57577_TGAC_v2_LG6: 756317-764144 Trifolium pratense
Tp57577_TGAC_v2_gene4793 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 759145-764144 Trifolium pratense
Tp57577_TGAC_v2_gene4793 5.0kb downstream 5.0kb downstream 7828 true Tp57577_TGAC_v2_LG6: 751317-759144 Trifolium pratense
Tp57577_TGAC_v2_gene4793 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 751317-756316 Trifolium pratense
Tp57577_TGAC_v2_gene4793 10.0kb upstream 10.0kb upstream 12828 true Tp57577_TGAC_v2_LG6: 756317-769144 Trifolium pratense
Tp57577_TGAC_v2_gene4793 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 759145-769144 Trifolium pratense
Tp57577_TGAC_v2_gene4793 10.0kb downstream 10.0kb downstream 12828 true Tp57577_TGAC_v2_LG6: 746317-759144 Trifolium pratense
Tp57577_TGAC_v2_gene4793 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 746317-756316 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029179 5273 Angiosperm View MSA
122301536 5265 Fabidae View MSA
124071680 5270 Rosid View MSA
123745896 5271 Pentapetalae View MSA
122785914 5272 Eudicot View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain