Gene : Tp57577_TGAC_v2_gene6961 T. pratense v2
Defline:  (1 of 4) PTHR33372:SF1 - CHLOROPLAST J-LIKE DOMAIN 1-CONTAINING PROTEIN Genomic Order:  523
Name:  ? Tp57577_TGAC_v2_gene6961 Secondary Identifier:  ? PAC:35973997
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6961 0.5kb upstream 0.5kb upstream 5596 true Tp57577_TGAC_v2_LG6: 4029955-4035550 Trifolium pratense
Tp57577_TGAC_v2_gene6961 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 4029955-4030454 Trifolium pratense
Tp57577_TGAC_v2_gene6961 0.5kb downstream 0.5kb downstream 5596 true Tp57577_TGAC_v2_LG6: 4030455-4036050 Trifolium pratense
Tp57577_TGAC_v2_gene6961 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 4035551-4036050 Trifolium pratense
Tp57577_TGAC_v2_gene6961 1.0kb upstream 1.0kb upstream 6096 true Tp57577_TGAC_v2_LG6: 4029455-4035550 Trifolium pratense
Tp57577_TGAC_v2_gene6961 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 4029455-4030454 Trifolium pratense
Tp57577_TGAC_v2_gene6961 1.0kb downstream 1.0kb downstream 6096 true Tp57577_TGAC_v2_LG6: 4030455-4036550 Trifolium pratense
Tp57577_TGAC_v2_gene6961 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 4035551-4036550 Trifolium pratense
Tp57577_TGAC_v2_gene6961 2.0kb upstream 2.0kb upstream 7096 true Tp57577_TGAC_v2_LG6: 4028455-4035550 Trifolium pratense
Tp57577_TGAC_v2_gene6961 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 4028455-4030454 Trifolium pratense
Tp57577_TGAC_v2_gene6961 2.0kb downstream 2.0kb downstream 7096 true Tp57577_TGAC_v2_LG6: 4030455-4037550 Trifolium pratense
Tp57577_TGAC_v2_gene6961 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 4035551-4037550 Trifolium pratense
Tp57577_TGAC_v2_gene6961 5.0kb upstream 5.0kb upstream 10096 true Tp57577_TGAC_v2_LG6: 4025455-4035550 Trifolium pratense
Tp57577_TGAC_v2_gene6961 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 4025455-4030454 Trifolium pratense
Tp57577_TGAC_v2_gene6961 5.0kb downstream 5.0kb downstream 10096 true Tp57577_TGAC_v2_LG6: 4030455-4040550 Trifolium pratense
Tp57577_TGAC_v2_gene6961 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 4035551-4040550 Trifolium pratense
Tp57577_TGAC_v2_gene6961 10.0kb upstream 10.0kb upstream 15096 true Tp57577_TGAC_v2_LG6: 4020455-4035550 Trifolium pratense
Tp57577_TGAC_v2_gene6961 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 4020455-4030454 Trifolium pratense
Tp57577_TGAC_v2_gene6961 10.0kb downstream 10.0kb downstream 15096 true Tp57577_TGAC_v2_LG6: 4030455-4045550 Trifolium pratense
Tp57577_TGAC_v2_gene6961 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 4035551-4045550 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308195 5265 Fabidae View MSA
124063539 5270 Rosid View MSA
123738014 5271 Pentapetalae View MSA
122791822 5272 Eudicot View MSA
122045556 5273 Angiosperm View MSA
121344488 5274 Embryophyte View MSA
123428806 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain