Gene : Tp57577_TGAC_v2_gene6971 T. pratense v2
Defline:  (1 of 3) PTHR30345 - RIBOSE-5-PHOSPHATE ISOMERASE B Genomic Order:  465
Name:  ? Tp57577_TGAC_v2_gene6971 Secondary Identifier:  ? PAC:35976654
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense CALVIN-PWY Trifolium pratense pathologic  
Tpratense NONOXIPENT-PWY Trifolium pratense pathologic  
Tpratense PENTOSE-P-PWY Trifolium pratense pathologic  
Tpratense PHOTOALL-PWY Trifolium pratense pathologic  
Tpratense PWY-5723 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6971 0.5kb upstream 0.5kb upstream 1594 true Tp57577_TGAC_v2_LG6: 3676078-3677671 Trifolium pratense
Tp57577_TGAC_v2_gene6971 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 3677172-3677671 Trifolium pratense
Tp57577_TGAC_v2_gene6971 0.5kb downstream 0.5kb downstream 1594 true Tp57577_TGAC_v2_LG6: 3675578-3677171 Trifolium pratense
Tp57577_TGAC_v2_gene6971 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 3675578-3676077 Trifolium pratense
Tp57577_TGAC_v2_gene6971 1.0kb upstream 1.0kb upstream 2094 true Tp57577_TGAC_v2_LG6: 3676078-3678171 Trifolium pratense
Tp57577_TGAC_v2_gene6971 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 3677172-3678171 Trifolium pratense
Tp57577_TGAC_v2_gene6971 1.0kb downstream 1.0kb downstream 2094 true Tp57577_TGAC_v2_LG6: 3675078-3677171 Trifolium pratense
Tp57577_TGAC_v2_gene6971 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 3675078-3676077 Trifolium pratense
Tp57577_TGAC_v2_gene6971 2.0kb upstream 2.0kb upstream 3094 true Tp57577_TGAC_v2_LG6: 3676078-3679171 Trifolium pratense
Tp57577_TGAC_v2_gene6971 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 3677172-3679171 Trifolium pratense
Tp57577_TGAC_v2_gene6971 2.0kb downstream 2.0kb downstream 3094 true Tp57577_TGAC_v2_LG6: 3674078-3677171 Trifolium pratense
Tp57577_TGAC_v2_gene6971 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 3674078-3676077 Trifolium pratense
Tp57577_TGAC_v2_gene6971 5.0kb upstream 5.0kb upstream 6094 true Tp57577_TGAC_v2_LG6: 3676078-3682171 Trifolium pratense
Tp57577_TGAC_v2_gene6971 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 3677172-3682171 Trifolium pratense
Tp57577_TGAC_v2_gene6971 5.0kb downstream 5.0kb downstream 6094 true Tp57577_TGAC_v2_LG6: 3671078-3677171 Trifolium pratense
Tp57577_TGAC_v2_gene6971 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 3671078-3676077 Trifolium pratense
Tp57577_TGAC_v2_gene6971 10.0kb upstream 10.0kb upstream 11094 true Tp57577_TGAC_v2_LG6: 3676078-3687171 Trifolium pratense
Tp57577_TGAC_v2_gene6971 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 3677172-3687171 Trifolium pratense
Tp57577_TGAC_v2_gene6971 10.0kb downstream 10.0kb downstream 11094 true Tp57577_TGAC_v2_LG6: 3666078-3677171 Trifolium pratense
Tp57577_TGAC_v2_gene6971 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 3666078-3676077 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303200 5265 Fabidae View MSA
124062390 5270 Rosid View MSA
123736544 5271 Pentapetalae View MSA
122789174 5272 Eudicot View MSA
122042906 5273 Angiosperm View MSA
121349668 5274 Embryophyte View MSA
123381392 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain