Gene : Tp57577_TGAC_v2_gene5874 T. pratense v2
Defline:  (1 of 2) K12667 - oligosaccharyltransferase complex subunit delta (ribophorin II) (SWP1, RPN2) Genomic Order:  1592
Name:  ? Tp57577_TGAC_v2_gene5874 Secondary Identifier:  ? PAC:35975567
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5874 0.5kb upstream 0.5kb upstream 8589 true Tp57577_TGAC_v2_LG6: 13128046-13136634 Trifolium pratense
Tp57577_TGAC_v2_gene5874 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 13128046-13128545 Trifolium pratense
Tp57577_TGAC_v2_gene5874 0.5kb downstream 0.5kb downstream 8589 true Tp57577_TGAC_v2_LG6: 13128546-13137134 Trifolium pratense
Tp57577_TGAC_v2_gene5874 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 13136635-13137134 Trifolium pratense
Tp57577_TGAC_v2_gene5874 1.0kb upstream 1.0kb upstream 9089 true Tp57577_TGAC_v2_LG6: 13127546-13136634 Trifolium pratense
Tp57577_TGAC_v2_gene5874 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 13127546-13128545 Trifolium pratense
Tp57577_TGAC_v2_gene5874 1.0kb downstream 1.0kb downstream 9089 true Tp57577_TGAC_v2_LG6: 13128546-13137634 Trifolium pratense
Tp57577_TGAC_v2_gene5874 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 13136635-13137634 Trifolium pratense
Tp57577_TGAC_v2_gene5874 2.0kb upstream 2.0kb upstream 10089 true Tp57577_TGAC_v2_LG6: 13126546-13136634 Trifolium pratense
Tp57577_TGAC_v2_gene5874 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 13126546-13128545 Trifolium pratense
Tp57577_TGAC_v2_gene5874 2.0kb downstream 2.0kb downstream 10089 true Tp57577_TGAC_v2_LG6: 13128546-13138634 Trifolium pratense
Tp57577_TGAC_v2_gene5874 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 13136635-13138634 Trifolium pratense
Tp57577_TGAC_v2_gene5874 5.0kb upstream 5.0kb upstream 13089 true Tp57577_TGAC_v2_LG6: 13123546-13136634 Trifolium pratense
Tp57577_TGAC_v2_gene5874 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 13123546-13128545 Trifolium pratense
Tp57577_TGAC_v2_gene5874 5.0kb downstream 5.0kb downstream 13089 true Tp57577_TGAC_v2_LG6: 13128546-13141634 Trifolium pratense
Tp57577_TGAC_v2_gene5874 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 13136635-13141634 Trifolium pratense
Tp57577_TGAC_v2_gene5874 10.0kb upstream 10.0kb upstream 18089 true Tp57577_TGAC_v2_LG6: 13118546-13136634 Trifolium pratense
Tp57577_TGAC_v2_gene5874 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 13118546-13128545 Trifolium pratense
Tp57577_TGAC_v2_gene5874 10.0kb downstream 10.0kb downstream 18089 true Tp57577_TGAC_v2_LG6: 13128546-13146634 Trifolium pratense
Tp57577_TGAC_v2_gene5874 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 13136635-13146634 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041028 5273 Angiosperm View MSA
122310826 5265 Fabidae View MSA
124066748 5270 Rosid View MSA
123737285 5271 Pentapetalae View MSA
122787550 5272 Eudicot View MSA
121344151 5274 Embryophyte View MSA
123379986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain