Gene : Tp57577_TGAC_v2_gene9643 T. pratense v2
Defline:  (1 of 1) K00949 - thiamine pyrophosphokinase (thiN, TPK1, THI80) Genomic Order:  248
Name:  ? Tp57577_TGAC_v2_gene9643 Secondary Identifier:  ? PAC:35974718
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6908 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9643 0.5kb upstream 0.5kb upstream 3842 true Tp57577_TGAC_v2_LG6: 1948695-1952536 Trifolium pratense
Tp57577_TGAC_v2_gene9643 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 1952037-1952536 Trifolium pratense
Tp57577_TGAC_v2_gene9643 0.5kb downstream 0.5kb downstream 3842 true Tp57577_TGAC_v2_LG6: 1948195-1952036 Trifolium pratense
Tp57577_TGAC_v2_gene9643 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 1948195-1948694 Trifolium pratense
Tp57577_TGAC_v2_gene9643 1.0kb upstream 1.0kb upstream 4342 true Tp57577_TGAC_v2_LG6: 1948695-1953036 Trifolium pratense
Tp57577_TGAC_v2_gene9643 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 1952037-1953036 Trifolium pratense
Tp57577_TGAC_v2_gene9643 1.0kb downstream 1.0kb downstream 4342 true Tp57577_TGAC_v2_LG6: 1947695-1952036 Trifolium pratense
Tp57577_TGAC_v2_gene9643 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 1947695-1948694 Trifolium pratense
Tp57577_TGAC_v2_gene9643 2.0kb upstream 2.0kb upstream 5342 true Tp57577_TGAC_v2_LG6: 1948695-1954036 Trifolium pratense
Tp57577_TGAC_v2_gene9643 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 1952037-1954036 Trifolium pratense
Tp57577_TGAC_v2_gene9643 2.0kb downstream 2.0kb downstream 5342 true Tp57577_TGAC_v2_LG6: 1946695-1952036 Trifolium pratense
Tp57577_TGAC_v2_gene9643 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 1946695-1948694 Trifolium pratense
Tp57577_TGAC_v2_gene9643 5.0kb upstream 5.0kb upstream 8342 true Tp57577_TGAC_v2_LG6: 1948695-1957036 Trifolium pratense
Tp57577_TGAC_v2_gene9643 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 1952037-1957036 Trifolium pratense
Tp57577_TGAC_v2_gene9643 5.0kb downstream 5.0kb downstream 8342 true Tp57577_TGAC_v2_LG6: 1943695-1952036 Trifolium pratense
Tp57577_TGAC_v2_gene9643 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 1943695-1948694 Trifolium pratense
Tp57577_TGAC_v2_gene9643 10.0kb upstream 10.0kb upstream 13342 true Tp57577_TGAC_v2_LG6: 1948695-1962036 Trifolium pratense
Tp57577_TGAC_v2_gene9643 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 1952037-1962036 Trifolium pratense
Tp57577_TGAC_v2_gene9643 10.0kb downstream 10.0kb downstream 13342 true Tp57577_TGAC_v2_LG6: 1938695-1952036 Trifolium pratense
Tp57577_TGAC_v2_gene9643 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 1938695-1948694 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303859 5265 Fabidae View MSA
124064421 5270 Rosid View MSA
123740086 5271 Pentapetalae View MSA
122769969 5272 Eudicot View MSA
122046316 5273 Angiosperm View MSA
121345006 5274 Embryophyte View MSA
123424730 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain