Gene : Tp57577_TGAC_v2_gene9647 T. pratense v2
Defline:  (1 of 2) PTHR21262:SF13 - RELA-SPOT LIKE PROTEIN RSH1 Genomic Order:  218
Name:  ? Tp57577_TGAC_v2_gene9647 Secondary Identifier:  ? PAC:35974999
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5080 Trifolium pratense pathologic  
Tpratense PWY-6433 Trifolium pratense pathologic  
Tpratense PWY-6598 Trifolium pratense pathologic  
Tpratense PWY-7036 Trifolium pratense pathologic  
Tpratense PWY-7601 Trifolium pratense pathologic  
Tpratense PWY-7606 Trifolium pratense pathologic  
Tpratense PWY-7619 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9647 0.5kb upstream 0.5kb upstream 10080 true Tp57577_TGAC_v2_LG6: 1768277-1778356 Trifolium pratense
Tp57577_TGAC_v2_gene9647 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 1777857-1778356 Trifolium pratense
Tp57577_TGAC_v2_gene9647 0.5kb downstream 0.5kb downstream 10080 true Tp57577_TGAC_v2_LG6: 1767777-1777856 Trifolium pratense
Tp57577_TGAC_v2_gene9647 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 1767777-1768276 Trifolium pratense
Tp57577_TGAC_v2_gene9647 1.0kb upstream 1.0kb upstream 10580 true Tp57577_TGAC_v2_LG6: 1768277-1778856 Trifolium pratense
Tp57577_TGAC_v2_gene9647 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 1777857-1778856 Trifolium pratense
Tp57577_TGAC_v2_gene9647 1.0kb downstream 1.0kb downstream 10580 true Tp57577_TGAC_v2_LG6: 1767277-1777856 Trifolium pratense
Tp57577_TGAC_v2_gene9647 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 1767277-1768276 Trifolium pratense
Tp57577_TGAC_v2_gene9647 2.0kb upstream 2.0kb upstream 11580 true Tp57577_TGAC_v2_LG6: 1768277-1779856 Trifolium pratense
Tp57577_TGAC_v2_gene9647 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 1777857-1779856 Trifolium pratense
Tp57577_TGAC_v2_gene9647 2.0kb downstream 2.0kb downstream 11580 true Tp57577_TGAC_v2_LG6: 1766277-1777856 Trifolium pratense
Tp57577_TGAC_v2_gene9647 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 1766277-1768276 Trifolium pratense
Tp57577_TGAC_v2_gene9647 5.0kb upstream 5.0kb upstream 14580 true Tp57577_TGAC_v2_LG6: 1768277-1782856 Trifolium pratense
Tp57577_TGAC_v2_gene9647 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 1777857-1782856 Trifolium pratense
Tp57577_TGAC_v2_gene9647 5.0kb downstream 5.0kb downstream 14580 true Tp57577_TGAC_v2_LG6: 1763277-1777856 Trifolium pratense
Tp57577_TGAC_v2_gene9647 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 1763277-1768276 Trifolium pratense
Tp57577_TGAC_v2_gene9647 10.0kb upstream 10.0kb upstream 19580 true Tp57577_TGAC_v2_LG6: 1768277-1787856 Trifolium pratense
Tp57577_TGAC_v2_gene9647 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 1777857-1787856 Trifolium pratense
Tp57577_TGAC_v2_gene9647 10.0kb downstream 10.0kb downstream 19580 true Tp57577_TGAC_v2_LG6: 1758277-1777856 Trifolium pratense
Tp57577_TGAC_v2_gene9647 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 1758277-1768276 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306868 5265 Fabidae View MSA
124066114 5270 Rosid View MSA
123750917 5271 Pentapetalae View MSA
122796089 5272 Eudicot View MSA
122044227 5273 Angiosperm View MSA
121348922 5274 Embryophyte View MSA
123424861 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain