Gene : Tp57577_TGAC_v2_gene9616 T. pratense v2
Defline:  (1 of 15) 2.4.2.39 - Xyloglucan 6-xylosyltransferase / Xyloglucan 6-alpha-D-xylosyltransferase Genomic Order:  249
Name:  ? Tp57577_TGAC_v2_gene9616 Secondary Identifier:  ? PAC:35975540
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5936 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9616 0.5kb upstream 0.5kb upstream 4863 true Tp57577_TGAC_v2_LG6: 1953987-1958849 Trifolium pratense
Tp57577_TGAC_v2_gene9616 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 1953987-1954486 Trifolium pratense
Tp57577_TGAC_v2_gene9616 0.5kb downstream 0.5kb downstream 4863 true Tp57577_TGAC_v2_LG6: 1954487-1959349 Trifolium pratense
Tp57577_TGAC_v2_gene9616 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 1958850-1959349 Trifolium pratense
Tp57577_TGAC_v2_gene9616 1.0kb upstream 1.0kb upstream 5363 true Tp57577_TGAC_v2_LG6: 1953487-1958849 Trifolium pratense
Tp57577_TGAC_v2_gene9616 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 1953487-1954486 Trifolium pratense
Tp57577_TGAC_v2_gene9616 1.0kb downstream 1.0kb downstream 5363 true Tp57577_TGAC_v2_LG6: 1954487-1959849 Trifolium pratense
Tp57577_TGAC_v2_gene9616 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 1958850-1959849 Trifolium pratense
Tp57577_TGAC_v2_gene9616 2.0kb upstream 2.0kb upstream 6363 true Tp57577_TGAC_v2_LG6: 1952487-1958849 Trifolium pratense
Tp57577_TGAC_v2_gene9616 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 1952487-1954486 Trifolium pratense
Tp57577_TGAC_v2_gene9616 2.0kb downstream 2.0kb downstream 6363 true Tp57577_TGAC_v2_LG6: 1954487-1960849 Trifolium pratense
Tp57577_TGAC_v2_gene9616 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 1958850-1960849 Trifolium pratense
Tp57577_TGAC_v2_gene9616 5.0kb upstream 5.0kb upstream 9363 true Tp57577_TGAC_v2_LG6: 1949487-1958849 Trifolium pratense
Tp57577_TGAC_v2_gene9616 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 1949487-1954486 Trifolium pratense
Tp57577_TGAC_v2_gene9616 5.0kb downstream 5.0kb downstream 9363 true Tp57577_TGAC_v2_LG6: 1954487-1963849 Trifolium pratense
Tp57577_TGAC_v2_gene9616 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 1958850-1963849 Trifolium pratense
Tp57577_TGAC_v2_gene9616 10.0kb upstream 10.0kb upstream 14363 true Tp57577_TGAC_v2_LG6: 1944487-1958849 Trifolium pratense
Tp57577_TGAC_v2_gene9616 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 1944487-1954486 Trifolium pratense
Tp57577_TGAC_v2_gene9616 10.0kb downstream 10.0kb downstream 14363 true Tp57577_TGAC_v2_LG6: 1954487-1968849 Trifolium pratense
Tp57577_TGAC_v2_gene9616 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 1958850-1968849 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311816 5265 Fabidae View MSA
124064369 5270 Rosid View MSA
123736946 5271 Pentapetalae View MSA
122789380 5272 Eudicot View MSA
122042255 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain