Gene : Tp57577_TGAC_v2_gene8394 T. pratense v2
Defline:  (1 of 2) K14568 - rRNA small subunit pseudouridine methyltransferase Nep1 (EMG1, NEP1) Genomic Order:  156
Name:  ? Tp57577_TGAC_v2_gene8394 Secondary Identifier:  ? PAC:35974922
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene8394 0.5kb upstream 0.5kb upstream 5057 true Tp57577_TGAC_v2_LG6: 1087195-1092251 Trifolium pratense
Tp57577_TGAC_v2_gene8394 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 1091752-1092251 Trifolium pratense
Tp57577_TGAC_v2_gene8394 0.5kb downstream 0.5kb downstream 5057 true Tp57577_TGAC_v2_LG6: 1086695-1091751 Trifolium pratense
Tp57577_TGAC_v2_gene8394 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 1086695-1087194 Trifolium pratense
Tp57577_TGAC_v2_gene8394 1.0kb upstream 1.0kb upstream 5557 true Tp57577_TGAC_v2_LG6: 1087195-1092751 Trifolium pratense
Tp57577_TGAC_v2_gene8394 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 1091752-1092751 Trifolium pratense
Tp57577_TGAC_v2_gene8394 1.0kb downstream 1.0kb downstream 5557 true Tp57577_TGAC_v2_LG6: 1086195-1091751 Trifolium pratense
Tp57577_TGAC_v2_gene8394 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 1086195-1087194 Trifolium pratense
Tp57577_TGAC_v2_gene8394 2.0kb upstream 2.0kb upstream 6557 true Tp57577_TGAC_v2_LG6: 1087195-1093751 Trifolium pratense
Tp57577_TGAC_v2_gene8394 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 1091752-1093751 Trifolium pratense
Tp57577_TGAC_v2_gene8394 2.0kb downstream 2.0kb downstream 6557 true Tp57577_TGAC_v2_LG6: 1085195-1091751 Trifolium pratense
Tp57577_TGAC_v2_gene8394 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 1085195-1087194 Trifolium pratense
Tp57577_TGAC_v2_gene8394 5.0kb upstream 5.0kb upstream 9557 true Tp57577_TGAC_v2_LG6: 1087195-1096751 Trifolium pratense
Tp57577_TGAC_v2_gene8394 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 1091752-1096751 Trifolium pratense
Tp57577_TGAC_v2_gene8394 5.0kb downstream 5.0kb downstream 9557 true Tp57577_TGAC_v2_LG6: 1082195-1091751 Trifolium pratense
Tp57577_TGAC_v2_gene8394 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 1082195-1087194 Trifolium pratense
Tp57577_TGAC_v2_gene8394 10.0kb upstream 10.0kb upstream 14557 true Tp57577_TGAC_v2_LG6: 1087195-1101751 Trifolium pratense
Tp57577_TGAC_v2_gene8394 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 1091752-1101751 Trifolium pratense
Tp57577_TGAC_v2_gene8394 10.0kb downstream 10.0kb downstream 14557 true Tp57577_TGAC_v2_LG6: 1077195-1091751 Trifolium pratense
Tp57577_TGAC_v2_gene8394 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 1077195-1087194 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303918 5265 Fabidae View MSA
124066897 5270 Rosid View MSA
123749345 5271 Pentapetalae View MSA
122789424 5272 Eudicot View MSA
122046063 5273 Angiosperm View MSA
121345370 5274 Embryophyte View MSA
123425050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain