Gene : Tp57577_TGAC_v2_gene11562 T. pratense v2

Defline:  (1 of 2) PTHR31384:SF20 - AUXIN RESPONSE FACTOR 4 Genomic Order:  1755
Name:  ? Tp57577_TGAC_v2_gene11562 Secondary Identifier:  ? PAC:35957870

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11562 0.5kb upstream 0.5kb upstream 6294 true Tp57577_TGAC_v2_LG7: 14474684-14480977 Trifolium pratense
Tp57577_TGAC_v2_gene11562 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 14480478-14480977 Trifolium pratense
Tp57577_TGAC_v2_gene11562 0.5kb downstream 0.5kb downstream 6294 true Tp57577_TGAC_v2_LG7: 14474184-14480477 Trifolium pratense
Tp57577_TGAC_v2_gene11562 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 14474184-14474683 Trifolium pratense
Tp57577_TGAC_v2_gene11562 1.0kb upstream 1.0kb upstream 6794 true Tp57577_TGAC_v2_LG7: 14474684-14481477 Trifolium pratense
Tp57577_TGAC_v2_gene11562 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 14480478-14481477 Trifolium pratense
Tp57577_TGAC_v2_gene11562 1.0kb downstream 1.0kb downstream 6794 true Tp57577_TGAC_v2_LG7: 14473684-14480477 Trifolium pratense
Tp57577_TGAC_v2_gene11562 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 14473684-14474683 Trifolium pratense
Tp57577_TGAC_v2_gene11562 2.0kb upstream 2.0kb upstream 7794 true Tp57577_TGAC_v2_LG7: 14474684-14482477 Trifolium pratense
Tp57577_TGAC_v2_gene11562 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 14480478-14482477 Trifolium pratense
Tp57577_TGAC_v2_gene11562 2.0kb downstream 2.0kb downstream 7794 true Tp57577_TGAC_v2_LG7: 14472684-14480477 Trifolium pratense
Tp57577_TGAC_v2_gene11562 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 14472684-14474683 Trifolium pratense
Tp57577_TGAC_v2_gene11562 5.0kb upstream 5.0kb upstream 10794 true Tp57577_TGAC_v2_LG7: 14474684-14485477 Trifolium pratense
Tp57577_TGAC_v2_gene11562 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 14480478-14485477 Trifolium pratense
Tp57577_TGAC_v2_gene11562 5.0kb downstream 5.0kb downstream 10794 true Tp57577_TGAC_v2_LG7: 14469684-14480477 Trifolium pratense
Tp57577_TGAC_v2_gene11562 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 14469684-14474683 Trifolium pratense
Tp57577_TGAC_v2_gene11562 10.0kb upstream 10.0kb upstream 15794 true Tp57577_TGAC_v2_LG7: 14474684-14490477 Trifolium pratense
Tp57577_TGAC_v2_gene11562 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 14480478-14490477 Trifolium pratense
Tp57577_TGAC_v2_gene11562 10.0kb downstream 10.0kb downstream 15794 true Tp57577_TGAC_v2_LG7: 14464684-14480477 Trifolium pratense
Tp57577_TGAC_v2_gene11562 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 14464684-14474683 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310336 5265 Fabidae View MSA
124066923 5270 Rosid View MSA
123747350 5271 Pentapetalae View MSA
122795169 5272 Eudicot View MSA
122043529 5273 Angiosperm View MSA
121310144 5274 Embryophyte View MSA
123347713 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain