Gene : Tp57577_TGAC_v2_gene11542 T. pratense v2
Defline:  (1 of 3) PTHR31165:SF10 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED Genomic Order:  1732
Name:  ? Tp57577_TGAC_v2_gene11542 Secondary Identifier:  ? PAC:35957699
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11542 0.5kb upstream 0.5kb upstream 1338 true Tp57577_TGAC_v2_LG7: 14242498-14243835 Trifolium pratense
Tp57577_TGAC_v2_gene11542 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 14242498-14242997 Trifolium pratense
Tp57577_TGAC_v2_gene11542 0.5kb downstream 0.5kb downstream 1338 true Tp57577_TGAC_v2_LG7: 14242998-14244335 Trifolium pratense
Tp57577_TGAC_v2_gene11542 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 14243836-14244335 Trifolium pratense
Tp57577_TGAC_v2_gene11542 1.0kb upstream 1.0kb upstream 1838 true Tp57577_TGAC_v2_LG7: 14241998-14243835 Trifolium pratense
Tp57577_TGAC_v2_gene11542 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 14241998-14242997 Trifolium pratense
Tp57577_TGAC_v2_gene11542 1.0kb downstream 1.0kb downstream 1838 true Tp57577_TGAC_v2_LG7: 14242998-14244835 Trifolium pratense
Tp57577_TGAC_v2_gene11542 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 14243836-14244835 Trifolium pratense
Tp57577_TGAC_v2_gene11542 2.0kb upstream 2.0kb upstream 2838 true Tp57577_TGAC_v2_LG7: 14240998-14243835 Trifolium pratense
Tp57577_TGAC_v2_gene11542 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 14240998-14242997 Trifolium pratense
Tp57577_TGAC_v2_gene11542 2.0kb downstream 2.0kb downstream 2838 true Tp57577_TGAC_v2_LG7: 14242998-14245835 Trifolium pratense
Tp57577_TGAC_v2_gene11542 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 14243836-14245835 Trifolium pratense
Tp57577_TGAC_v2_gene11542 5.0kb upstream 5.0kb upstream 5838 true Tp57577_TGAC_v2_LG7: 14237998-14243835 Trifolium pratense
Tp57577_TGAC_v2_gene11542 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 14237998-14242997 Trifolium pratense
Tp57577_TGAC_v2_gene11542 5.0kb downstream 5.0kb downstream 5838 true Tp57577_TGAC_v2_LG7: 14242998-14248835 Trifolium pratense
Tp57577_TGAC_v2_gene11542 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 14243836-14248835 Trifolium pratense
Tp57577_TGAC_v2_gene11542 10.0kb upstream 10.0kb upstream 10838 true Tp57577_TGAC_v2_LG7: 14232998-14243835 Trifolium pratense
Tp57577_TGAC_v2_gene11542 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 14232998-14242997 Trifolium pratense
Tp57577_TGAC_v2_gene11542 10.0kb downstream 10.0kb downstream 10838 true Tp57577_TGAC_v2_LG7: 14242998-14253835 Trifolium pratense
Tp57577_TGAC_v2_gene11542 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 14243836-14253835 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792183 5273 Angiosperm View MSA
122309730 5265 Fabidae View MSA
124064953 5270 Rosid View MSA
123750207 5271 Pentapetalae View MSA
122796804 5272 Eudicot View MSA
121063429 5274 Embryophyte View MSA
123103178 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain