Gene : Tp57577_TGAC_v2_gene11549 T. pratense v2
Defline:  (1 of 1) PTHR12565//PTHR12565:SF82 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1718
Name:  ? Tp57577_TGAC_v2_gene11549 Secondary Identifier:  ? PAC:35957399
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11549 0.5kb upstream 0.5kb upstream 3259 true Tp57577_TGAC_v2_LG7: 14106707-14109965 Trifolium pratense
Tp57577_TGAC_v2_gene11549 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 14109466-14109965 Trifolium pratense
Tp57577_TGAC_v2_gene11549 0.5kb downstream 0.5kb downstream 3259 true Tp57577_TGAC_v2_LG7: 14106207-14109465 Trifolium pratense
Tp57577_TGAC_v2_gene11549 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 14106207-14106706 Trifolium pratense
Tp57577_TGAC_v2_gene11549 1.0kb upstream 1.0kb upstream 3759 true Tp57577_TGAC_v2_LG7: 14106707-14110465 Trifolium pratense
Tp57577_TGAC_v2_gene11549 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 14109466-14110465 Trifolium pratense
Tp57577_TGAC_v2_gene11549 1.0kb downstream 1.0kb downstream 3759 true Tp57577_TGAC_v2_LG7: 14105707-14109465 Trifolium pratense
Tp57577_TGAC_v2_gene11549 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 14105707-14106706 Trifolium pratense
Tp57577_TGAC_v2_gene11549 2.0kb upstream 2.0kb upstream 4759 true Tp57577_TGAC_v2_LG7: 14106707-14111465 Trifolium pratense
Tp57577_TGAC_v2_gene11549 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 14109466-14111465 Trifolium pratense
Tp57577_TGAC_v2_gene11549 2.0kb downstream 2.0kb downstream 4759 true Tp57577_TGAC_v2_LG7: 14104707-14109465 Trifolium pratense
Tp57577_TGAC_v2_gene11549 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 14104707-14106706 Trifolium pratense
Tp57577_TGAC_v2_gene11549 5.0kb upstream 5.0kb upstream 7759 true Tp57577_TGAC_v2_LG7: 14106707-14114465 Trifolium pratense
Tp57577_TGAC_v2_gene11549 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 14109466-14114465 Trifolium pratense
Tp57577_TGAC_v2_gene11549 5.0kb downstream 5.0kb downstream 7759 true Tp57577_TGAC_v2_LG7: 14101707-14109465 Trifolium pratense
Tp57577_TGAC_v2_gene11549 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 14101707-14106706 Trifolium pratense
Tp57577_TGAC_v2_gene11549 10.0kb upstream 10.0kb upstream 12759 true Tp57577_TGAC_v2_LG7: 14106707-14119465 Trifolium pratense
Tp57577_TGAC_v2_gene11549 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 14109466-14119465 Trifolium pratense
Tp57577_TGAC_v2_gene11549 10.0kb downstream 10.0kb downstream 12759 true Tp57577_TGAC_v2_LG7: 14096707-14109465 Trifolium pratense
Tp57577_TGAC_v2_gene11549 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 14096707-14106706 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298441 5265 Fabidae View MSA
124070822 5270 Rosid View MSA
123748515 5271 Pentapetalae View MSA
122793981 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain