Gene : Tp57577_TGAC_v2_gene12317 T. pratense v2
Defline:  (1 of 1) K07056 - 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] (rsmI) Genomic Order:  1162
Name:  ? Tp57577_TGAC_v2_gene12317 Secondary Identifier:  ? PAC:35955501
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12317 0.5kb upstream 0.5kb upstream 8747 true Tp57577_TGAC_v2_LG7: 9219002-9227748 Trifolium pratense
Tp57577_TGAC_v2_gene12317 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 9227249-9227748 Trifolium pratense
Tp57577_TGAC_v2_gene12317 0.5kb downstream 0.5kb downstream 8747 true Tp57577_TGAC_v2_LG7: 9218502-9227248 Trifolium pratense
Tp57577_TGAC_v2_gene12317 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 9218502-9219001 Trifolium pratense
Tp57577_TGAC_v2_gene12317 1.0kb upstream 1.0kb upstream 9247 true Tp57577_TGAC_v2_LG7: 9219002-9228248 Trifolium pratense
Tp57577_TGAC_v2_gene12317 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 9227249-9228248 Trifolium pratense
Tp57577_TGAC_v2_gene12317 1.0kb downstream 1.0kb downstream 9247 true Tp57577_TGAC_v2_LG7: 9218002-9227248 Trifolium pratense
Tp57577_TGAC_v2_gene12317 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 9218002-9219001 Trifolium pratense
Tp57577_TGAC_v2_gene12317 2.0kb upstream 2.0kb upstream 10247 true Tp57577_TGAC_v2_LG7: 9219002-9229248 Trifolium pratense
Tp57577_TGAC_v2_gene12317 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 9227249-9229248 Trifolium pratense
Tp57577_TGAC_v2_gene12317 2.0kb downstream 2.0kb downstream 10247 true Tp57577_TGAC_v2_LG7: 9217002-9227248 Trifolium pratense
Tp57577_TGAC_v2_gene12317 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 9217002-9219001 Trifolium pratense
Tp57577_TGAC_v2_gene12317 5.0kb upstream 5.0kb upstream 13247 true Tp57577_TGAC_v2_LG7: 9219002-9232248 Trifolium pratense
Tp57577_TGAC_v2_gene12317 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 9227249-9232248 Trifolium pratense
Tp57577_TGAC_v2_gene12317 5.0kb downstream 5.0kb downstream 13247 true Tp57577_TGAC_v2_LG7: 9214002-9227248 Trifolium pratense
Tp57577_TGAC_v2_gene12317 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 9214002-9219001 Trifolium pratense
Tp57577_TGAC_v2_gene12317 10.0kb upstream 10.0kb upstream 18247 true Tp57577_TGAC_v2_LG7: 9219002-9237248 Trifolium pratense
Tp57577_TGAC_v2_gene12317 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 9227249-9237248 Trifolium pratense
Tp57577_TGAC_v2_gene12317 10.0kb downstream 10.0kb downstream 18247 true Tp57577_TGAC_v2_LG7: 9209002-9227248 Trifolium pratense
Tp57577_TGAC_v2_gene12317 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 9209002-9219001 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307010 5265 Fabidae View MSA
124062180 5270 Rosid View MSA
123741052 5271 Pentapetalae View MSA
122786797 5272 Eudicot View MSA
122043278 5273 Angiosperm View MSA
121347213 5274 Embryophyte View MSA
123424563 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain