Gene : Tp57577_TGAC_v2_gene12315 T. pratense v2

Genomic Order:  1332 Name:  ? Tp57577_TGAC_v2_gene12315
Secondary Identifier:  ? PAC:35956981

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12315 0.5kb upstream 0.5kb upstream 5466 true Tp57577_TGAC_v2_LG7: 10414515-10419980 Trifolium pratense
Tp57577_TGAC_v2_gene12315 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 10419481-10419980 Trifolium pratense
Tp57577_TGAC_v2_gene12315 0.5kb downstream 0.5kb downstream 5466 true Tp57577_TGAC_v2_LG7: 10414015-10419480 Trifolium pratense
Tp57577_TGAC_v2_gene12315 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 10414015-10414514 Trifolium pratense
Tp57577_TGAC_v2_gene12315 1.0kb upstream 1.0kb upstream 5966 true Tp57577_TGAC_v2_LG7: 10414515-10420480 Trifolium pratense
Tp57577_TGAC_v2_gene12315 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 10419481-10420480 Trifolium pratense
Tp57577_TGAC_v2_gene12315 1.0kb downstream 1.0kb downstream 5966 true Tp57577_TGAC_v2_LG7: 10413515-10419480 Trifolium pratense
Tp57577_TGAC_v2_gene12315 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 10413515-10414514 Trifolium pratense
Tp57577_TGAC_v2_gene12315 2.0kb upstream 2.0kb upstream 6966 true Tp57577_TGAC_v2_LG7: 10414515-10421480 Trifolium pratense
Tp57577_TGAC_v2_gene12315 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 10419481-10421480 Trifolium pratense
Tp57577_TGAC_v2_gene12315 2.0kb downstream 2.0kb downstream 6966 true Tp57577_TGAC_v2_LG7: 10412515-10419480 Trifolium pratense
Tp57577_TGAC_v2_gene12315 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 10412515-10414514 Trifolium pratense
Tp57577_TGAC_v2_gene12315 5.0kb upstream 5.0kb upstream 9966 true Tp57577_TGAC_v2_LG7: 10414515-10424480 Trifolium pratense
Tp57577_TGAC_v2_gene12315 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 10419481-10424480 Trifolium pratense
Tp57577_TGAC_v2_gene12315 5.0kb downstream 5.0kb downstream 9966 true Tp57577_TGAC_v2_LG7: 10409515-10419480 Trifolium pratense
Tp57577_TGAC_v2_gene12315 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 10409515-10414514 Trifolium pratense
Tp57577_TGAC_v2_gene12315 10.0kb upstream 10.0kb upstream 14966 true Tp57577_TGAC_v2_LG7: 10414515-10429480 Trifolium pratense
Tp57577_TGAC_v2_gene12315 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 10419481-10429480 Trifolium pratense
Tp57577_TGAC_v2_gene12315 10.0kb downstream 10.0kb downstream 14966 true Tp57577_TGAC_v2_LG7: 10404515-10419480 Trifolium pratense
Tp57577_TGAC_v2_gene12315 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 10404515-10414514 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299518 5265 Fabidae View MSA
124071526 5270 Rosid View MSA
123740784 5271 Pentapetalae View MSA
122794122 5272 Eudicot View MSA
122050124 5273 Angiosperm View MSA
121311754 5274 Embryophyte View MSA
123349009 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain