Gene : Tp57577_TGAC_v2_gene12462 T. pratense v2
Defline:  (1 of 1) PTHR23406:SF31 - NADP-DEPENDENT MALIC ENZYME 2-RELATED Genomic Order:  1277
Name:  ? Tp57577_TGAC_v2_gene12462 Secondary Identifier:  ? PAC:35958164
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLUCONEO-PWY Trifolium pratense pathologic  
Tpratense PWY-241 Trifolium pratense pathologic  
Tpratense PWY-7117 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12462 0.5kb upstream 0.5kb upstream 4799 true Tp57577_TGAC_v2_LG7: 10047033-10051831 Trifolium pratense
Tp57577_TGAC_v2_gene12462 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 10051332-10051831 Trifolium pratense
Tp57577_TGAC_v2_gene12462 0.5kb downstream 0.5kb downstream 4799 true Tp57577_TGAC_v2_LG7: 10046533-10051331 Trifolium pratense
Tp57577_TGAC_v2_gene12462 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 10046533-10047032 Trifolium pratense
Tp57577_TGAC_v2_gene12462 1.0kb upstream 1.0kb upstream 5299 true Tp57577_TGAC_v2_LG7: 10047033-10052331 Trifolium pratense
Tp57577_TGAC_v2_gene12462 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 10051332-10052331 Trifolium pratense
Tp57577_TGAC_v2_gene12462 1.0kb downstream 1.0kb downstream 5299 true Tp57577_TGAC_v2_LG7: 10046033-10051331 Trifolium pratense
Tp57577_TGAC_v2_gene12462 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 10046033-10047032 Trifolium pratense
Tp57577_TGAC_v2_gene12462 2.0kb upstream 2.0kb upstream 6299 true Tp57577_TGAC_v2_LG7: 10047033-10053331 Trifolium pratense
Tp57577_TGAC_v2_gene12462 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 10051332-10053331 Trifolium pratense
Tp57577_TGAC_v2_gene12462 2.0kb downstream 2.0kb downstream 6299 true Tp57577_TGAC_v2_LG7: 10045033-10051331 Trifolium pratense
Tp57577_TGAC_v2_gene12462 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 10045033-10047032 Trifolium pratense
Tp57577_TGAC_v2_gene12462 5.0kb upstream 5.0kb upstream 9299 true Tp57577_TGAC_v2_LG7: 10047033-10056331 Trifolium pratense
Tp57577_TGAC_v2_gene12462 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 10051332-10056331 Trifolium pratense
Tp57577_TGAC_v2_gene12462 5.0kb downstream 5.0kb downstream 9299 true Tp57577_TGAC_v2_LG7: 10042033-10051331 Trifolium pratense
Tp57577_TGAC_v2_gene12462 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 10042033-10047032 Trifolium pratense
Tp57577_TGAC_v2_gene12462 10.0kb upstream 10.0kb upstream 14299 true Tp57577_TGAC_v2_LG7: 10047033-10061331 Trifolium pratense
Tp57577_TGAC_v2_gene12462 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 10051332-10061331 Trifolium pratense
Tp57577_TGAC_v2_gene12462 10.0kb downstream 10.0kb downstream 14299 true Tp57577_TGAC_v2_LG7: 10037033-10051331 Trifolium pratense
Tp57577_TGAC_v2_gene12462 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 10037033-10047032 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306748 5265 Fabidae View MSA
124068705 5270 Rosid View MSA
123751350 5271 Pentapetalae View MSA
122794130 5272 Eudicot View MSA
122042224 5273 Angiosperm View MSA
121345569 5274 Embryophyte View MSA
123428715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain