Gene : Tp57577_TGAC_v2_gene12429 T. pratense v2
Defline:  (1 of 2) K00306 - sarcosine oxidase / L-pipecolate oxidase (PIPOX) Genomic Order:  1302
Name:  ? Tp57577_TGAC_v2_gene12429 Secondary Identifier:  ? PAC:35957571
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12429 0.5kb upstream 0.5kb upstream 1963 true Tp57577_TGAC_v2_LG7: 10196491-10198453 Trifolium pratense
Tp57577_TGAC_v2_gene12429 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 10196491-10196990 Trifolium pratense
Tp57577_TGAC_v2_gene12429 0.5kb downstream 0.5kb downstream 1963 true Tp57577_TGAC_v2_LG7: 10196991-10198953 Trifolium pratense
Tp57577_TGAC_v2_gene12429 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 10198454-10198953 Trifolium pratense
Tp57577_TGAC_v2_gene12429 1.0kb upstream 1.0kb upstream 2463 true Tp57577_TGAC_v2_LG7: 10195991-10198453 Trifolium pratense
Tp57577_TGAC_v2_gene12429 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 10195991-10196990 Trifolium pratense
Tp57577_TGAC_v2_gene12429 1.0kb downstream 1.0kb downstream 2463 true Tp57577_TGAC_v2_LG7: 10196991-10199453 Trifolium pratense
Tp57577_TGAC_v2_gene12429 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 10198454-10199453 Trifolium pratense
Tp57577_TGAC_v2_gene12429 2.0kb upstream 2.0kb upstream 3463 true Tp57577_TGAC_v2_LG7: 10194991-10198453 Trifolium pratense
Tp57577_TGAC_v2_gene12429 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 10194991-10196990 Trifolium pratense
Tp57577_TGAC_v2_gene12429 2.0kb downstream 2.0kb downstream 3463 true Tp57577_TGAC_v2_LG7: 10196991-10200453 Trifolium pratense
Tp57577_TGAC_v2_gene12429 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 10198454-10200453 Trifolium pratense
Tp57577_TGAC_v2_gene12429 5.0kb upstream 5.0kb upstream 6463 true Tp57577_TGAC_v2_LG7: 10191991-10198453 Trifolium pratense
Tp57577_TGAC_v2_gene12429 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 10191991-10196990 Trifolium pratense
Tp57577_TGAC_v2_gene12429 5.0kb downstream 5.0kb downstream 6463 true Tp57577_TGAC_v2_LG7: 10196991-10203453 Trifolium pratense
Tp57577_TGAC_v2_gene12429 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 10198454-10203453 Trifolium pratense
Tp57577_TGAC_v2_gene12429 10.0kb upstream 10.0kb upstream 11463 true Tp57577_TGAC_v2_LG7: 10186991-10198453 Trifolium pratense
Tp57577_TGAC_v2_gene12429 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 10186991-10196990 Trifolium pratense
Tp57577_TGAC_v2_gene12429 10.0kb downstream 10.0kb downstream 11463 true Tp57577_TGAC_v2_LG7: 10196991-10208453 Trifolium pratense
Tp57577_TGAC_v2_gene12429 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 10198454-10208453 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301147 5265 Fabidae View MSA
124067197 5270 Rosid View MSA
123745961 5271 Pentapetalae View MSA
122793788 5272 Eudicot View MSA
122051106 5273 Angiosperm View MSA
121351535 5274 Embryophyte View MSA
123427900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain