Gene : Tp57577_TGAC_v2_gene12478 T. pratense v2
Defline:  (1 of 3) PTHR12103:SF21 - IMP-GMP SPECIFIC 5-NUCLEOTIDASE, PUTATIVE-RELATED Genomic Order:  1195
Name:  ? Tp57577_TGAC_v2_gene12478 Secondary Identifier:  ? PAC:35955274
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5381 Trifolium pratense pathologic  
Tpratense PWY-5695 Trifolium pratense pathologic  
Tpratense PWY-6606 Trifolium pratense pathologic  
Tpratense PWY-6608 Trifolium pratense pathologic  
Tpratense PWY-7185 Trifolium pratense pathologic  
Tpratense SALVADEHYPOX-PWY Trifolium pratense pathologic  
Tpratense URSIN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12478 0.5kb upstream 0.5kb upstream 6639 true Tp57577_TGAC_v2_LG7: 9412293-9418931 Trifolium pratense
Tp57577_TGAC_v2_gene12478 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 9418432-9418931 Trifolium pratense
Tp57577_TGAC_v2_gene12478 0.5kb downstream 0.5kb downstream 6639 true Tp57577_TGAC_v2_LG7: 9411793-9418431 Trifolium pratense
Tp57577_TGAC_v2_gene12478 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 9411793-9412292 Trifolium pratense
Tp57577_TGAC_v2_gene12478 1.0kb upstream 1.0kb upstream 7139 true Tp57577_TGAC_v2_LG7: 9412293-9419431 Trifolium pratense
Tp57577_TGAC_v2_gene12478 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 9418432-9419431 Trifolium pratense
Tp57577_TGAC_v2_gene12478 1.0kb downstream 1.0kb downstream 7139 true Tp57577_TGAC_v2_LG7: 9411293-9418431 Trifolium pratense
Tp57577_TGAC_v2_gene12478 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 9411293-9412292 Trifolium pratense
Tp57577_TGAC_v2_gene12478 2.0kb upstream 2.0kb upstream 8139 true Tp57577_TGAC_v2_LG7: 9412293-9420431 Trifolium pratense
Tp57577_TGAC_v2_gene12478 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 9418432-9420431 Trifolium pratense
Tp57577_TGAC_v2_gene12478 2.0kb downstream 2.0kb downstream 8139 true Tp57577_TGAC_v2_LG7: 9410293-9418431 Trifolium pratense
Tp57577_TGAC_v2_gene12478 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 9410293-9412292 Trifolium pratense
Tp57577_TGAC_v2_gene12478 5.0kb upstream 5.0kb upstream 11139 true Tp57577_TGAC_v2_LG7: 9412293-9423431 Trifolium pratense
Tp57577_TGAC_v2_gene12478 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 9418432-9423431 Trifolium pratense
Tp57577_TGAC_v2_gene12478 5.0kb downstream 5.0kb downstream 11139 true Tp57577_TGAC_v2_LG7: 9407293-9418431 Trifolium pratense
Tp57577_TGAC_v2_gene12478 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 9407293-9412292 Trifolium pratense
Tp57577_TGAC_v2_gene12478 10.0kb upstream 10.0kb upstream 16139 true Tp57577_TGAC_v2_LG7: 9412293-9428431 Trifolium pratense
Tp57577_TGAC_v2_gene12478 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 9418432-9428431 Trifolium pratense
Tp57577_TGAC_v2_gene12478 10.0kb downstream 10.0kb downstream 16139 true Tp57577_TGAC_v2_LG7: 9402293-9418431 Trifolium pratense
Tp57577_TGAC_v2_gene12478 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 9402293-9412292 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305007 5265 Fabidae View MSA
124068860 5270 Rosid View MSA
123738090 5271 Pentapetalae View MSA
122788601 5272 Eudicot View MSA
122047149 5273 Angiosperm View MSA
121350756 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain