Gene : Tp57577_TGAC_v2_gene12492 T. pratense v2

Defline:  (1 of 1) K02738 - 20S proteasome subunit beta 1 (PSMB6) Genomic Order:  1279
Name:  ? Tp57577_TGAC_v2_gene12492 Secondary Identifier:  ? PAC:35958415

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12492 0.5kb upstream 0.5kb upstream 4814 true Tp57577_TGAC_v2_LG7: 10064343-10069156 Trifolium pratense
Tp57577_TGAC_v2_gene12492 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 10064343-10064842 Trifolium pratense
Tp57577_TGAC_v2_gene12492 0.5kb downstream 0.5kb downstream 4814 true Tp57577_TGAC_v2_LG7: 10064843-10069656 Trifolium pratense
Tp57577_TGAC_v2_gene12492 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 10069157-10069656 Trifolium pratense
Tp57577_TGAC_v2_gene12492 1.0kb upstream 1.0kb upstream 5314 true Tp57577_TGAC_v2_LG7: 10063843-10069156 Trifolium pratense
Tp57577_TGAC_v2_gene12492 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 10063843-10064842 Trifolium pratense
Tp57577_TGAC_v2_gene12492 1.0kb downstream 1.0kb downstream 5314 true Tp57577_TGAC_v2_LG7: 10064843-10070156 Trifolium pratense
Tp57577_TGAC_v2_gene12492 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 10069157-10070156 Trifolium pratense
Tp57577_TGAC_v2_gene12492 2.0kb upstream 2.0kb upstream 6314 true Tp57577_TGAC_v2_LG7: 10062843-10069156 Trifolium pratense
Tp57577_TGAC_v2_gene12492 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 10062843-10064842 Trifolium pratense
Tp57577_TGAC_v2_gene12492 2.0kb downstream 2.0kb downstream 6314 true Tp57577_TGAC_v2_LG7: 10064843-10071156 Trifolium pratense
Tp57577_TGAC_v2_gene12492 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 10069157-10071156 Trifolium pratense
Tp57577_TGAC_v2_gene12492 5.0kb upstream 5.0kb upstream 9314 true Tp57577_TGAC_v2_LG7: 10059843-10069156 Trifolium pratense
Tp57577_TGAC_v2_gene12492 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 10059843-10064842 Trifolium pratense
Tp57577_TGAC_v2_gene12492 5.0kb downstream 5.0kb downstream 9314 true Tp57577_TGAC_v2_LG7: 10064843-10074156 Trifolium pratense
Tp57577_TGAC_v2_gene12492 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 10069157-10074156 Trifolium pratense
Tp57577_TGAC_v2_gene12492 10.0kb upstream 10.0kb upstream 14314 true Tp57577_TGAC_v2_LG7: 10054843-10069156 Trifolium pratense
Tp57577_TGAC_v2_gene12492 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 10054843-10064842 Trifolium pratense
Tp57577_TGAC_v2_gene12492 10.0kb downstream 10.0kb downstream 14314 true Tp57577_TGAC_v2_LG7: 10064843-10079156 Trifolium pratense
Tp57577_TGAC_v2_gene12492 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 10069157-10079156 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308498 5265 Fabidae View MSA
124072118 5270 Rosid View MSA
123739837 5271 Pentapetalae View MSA
122787112 5272 Eudicot View MSA
122042540 5273 Angiosperm View MSA
121348107 5274 Embryophyte View MSA
123423963 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain