Gene : Tp57577_TGAC_v2_gene15106 T. pratense v2
Defline:  (1 of 1) K17913 - carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase (CCD8) Genomic Order:  75
Name:  ? Tp57577_TGAC_v2_gene15106 Secondary Identifier:  ? PAC:35955843
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7101 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene15106 0.5kb upstream 0.5kb upstream 2748 true Tp57577_TGAC_v2_LG7: 559614-562361 Trifolium pratense
Tp57577_TGAC_v2_gene15106 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 559614-560113 Trifolium pratense
Tp57577_TGAC_v2_gene15106 0.5kb downstream 0.5kb downstream 2748 true Tp57577_TGAC_v2_LG7: 560114-562861 Trifolium pratense
Tp57577_TGAC_v2_gene15106 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 562362-562861 Trifolium pratense
Tp57577_TGAC_v2_gene15106 1.0kb upstream 1.0kb upstream 3248 true Tp57577_TGAC_v2_LG7: 559114-562361 Trifolium pratense
Tp57577_TGAC_v2_gene15106 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 559114-560113 Trifolium pratense
Tp57577_TGAC_v2_gene15106 1.0kb downstream 1.0kb downstream 3248 true Tp57577_TGAC_v2_LG7: 560114-563361 Trifolium pratense
Tp57577_TGAC_v2_gene15106 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 562362-563361 Trifolium pratense
Tp57577_TGAC_v2_gene15106 2.0kb upstream 2.0kb upstream 4248 true Tp57577_TGAC_v2_LG7: 558114-562361 Trifolium pratense
Tp57577_TGAC_v2_gene15106 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 558114-560113 Trifolium pratense
Tp57577_TGAC_v2_gene15106 2.0kb downstream 2.0kb downstream 4248 true Tp57577_TGAC_v2_LG7: 560114-564361 Trifolium pratense
Tp57577_TGAC_v2_gene15106 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 562362-564361 Trifolium pratense
Tp57577_TGAC_v2_gene15106 5.0kb upstream 5.0kb upstream 7248 true Tp57577_TGAC_v2_LG7: 555114-562361 Trifolium pratense
Tp57577_TGAC_v2_gene15106 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 555114-560113 Trifolium pratense
Tp57577_TGAC_v2_gene15106 5.0kb downstream 5.0kb downstream 7248 true Tp57577_TGAC_v2_LG7: 560114-567361 Trifolium pratense
Tp57577_TGAC_v2_gene15106 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 562362-567361 Trifolium pratense
Tp57577_TGAC_v2_gene15106 10.0kb upstream 10.0kb upstream 12248 true Tp57577_TGAC_v2_LG7: 550114-562361 Trifolium pratense
Tp57577_TGAC_v2_gene15106 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 550114-560113 Trifolium pratense
Tp57577_TGAC_v2_gene15106 10.0kb downstream 10.0kb downstream 12248 true Tp57577_TGAC_v2_LG7: 560114-572361 Trifolium pratense
Tp57577_TGAC_v2_gene15106 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 562362-572361 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305580 5265 Fabidae View MSA
124065320 5270 Rosid View MSA
123738795 5271 Pentapetalae View MSA
122791259 5272 Eudicot View MSA
122048984 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344649 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain