Gene : Tp57577_TGAC_v2_gene1366 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  898
Name:  ? Tp57577_TGAC_v2_gene1366 Secondary Identifier:  ? PAC:35958302
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1366 0.5kb upstream 0.5kb upstream 2635 true Tp57577_TGAC_v2_LG7: 6889948-6892582 Trifolium pratense
Tp57577_TGAC_v2_gene1366 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 6889948-6890447 Trifolium pratense
Tp57577_TGAC_v2_gene1366 0.5kb downstream 0.5kb downstream 2635 true Tp57577_TGAC_v2_LG7: 6890448-6893082 Trifolium pratense
Tp57577_TGAC_v2_gene1366 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 6892583-6893082 Trifolium pratense
Tp57577_TGAC_v2_gene1366 1.0kb upstream 1.0kb upstream 3135 true Tp57577_TGAC_v2_LG7: 6889448-6892582 Trifolium pratense
Tp57577_TGAC_v2_gene1366 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 6889448-6890447 Trifolium pratense
Tp57577_TGAC_v2_gene1366 1.0kb downstream 1.0kb downstream 3135 true Tp57577_TGAC_v2_LG7: 6890448-6893582 Trifolium pratense
Tp57577_TGAC_v2_gene1366 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 6892583-6893582 Trifolium pratense
Tp57577_TGAC_v2_gene1366 2.0kb upstream 2.0kb upstream 4135 true Tp57577_TGAC_v2_LG7: 6888448-6892582 Trifolium pratense
Tp57577_TGAC_v2_gene1366 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 6888448-6890447 Trifolium pratense
Tp57577_TGAC_v2_gene1366 2.0kb downstream 2.0kb downstream 4135 true Tp57577_TGAC_v2_LG7: 6890448-6894582 Trifolium pratense
Tp57577_TGAC_v2_gene1366 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 6892583-6894582 Trifolium pratense
Tp57577_TGAC_v2_gene1366 5.0kb upstream 5.0kb upstream 7135 true Tp57577_TGAC_v2_LG7: 6885448-6892582 Trifolium pratense
Tp57577_TGAC_v2_gene1366 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 6885448-6890447 Trifolium pratense
Tp57577_TGAC_v2_gene1366 5.0kb downstream 5.0kb downstream 7135 true Tp57577_TGAC_v2_LG7: 6890448-6897582 Trifolium pratense
Tp57577_TGAC_v2_gene1366 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 6892583-6897582 Trifolium pratense
Tp57577_TGAC_v2_gene1366 10.0kb upstream 10.0kb upstream 12135 true Tp57577_TGAC_v2_LG7: 6880448-6892582 Trifolium pratense
Tp57577_TGAC_v2_gene1366 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 6880448-6890447 Trifolium pratense
Tp57577_TGAC_v2_gene1366 10.0kb downstream 10.0kb downstream 12135 true Tp57577_TGAC_v2_LG7: 6890448-6902582 Trifolium pratense
Tp57577_TGAC_v2_gene1366 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 6892583-6902582 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304445 5265 Fabidae View MSA
124072342 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain