Gene : Tp57577_TGAC_v2_gene13952 T. pratense v2
Defline:  (1 of 2) 4.1.1.37 - Uroporphyrinogen decarboxylase / Uroporphyrinogen-III carboxy-lyase Genomic Order:  2916
Name:  ? Tp57577_TGAC_v2_gene13952 Secondary Identifier:  ? PAC:35955448
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense CHLOROPHYLL-SYN Trifolium pratense pathologic  
Tpratense HEME-BIOSYNTHESIS-II Trifolium pratense pathologic  
Tpratense PWY-5918 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13952 0.5kb upstream 0.5kb upstream 4999 true Tp57577_TGAC_v2_LG7: 25982301-25987299 Trifolium pratense
Tp57577_TGAC_v2_gene13952 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 25982301-25982800 Trifolium pratense
Tp57577_TGAC_v2_gene13952 0.5kb downstream 0.5kb downstream 4999 true Tp57577_TGAC_v2_LG7: 25982801-25987799 Trifolium pratense
Tp57577_TGAC_v2_gene13952 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 25987300-25987799 Trifolium pratense
Tp57577_TGAC_v2_gene13952 1.0kb upstream 1.0kb upstream 5499 true Tp57577_TGAC_v2_LG7: 25981801-25987299 Trifolium pratense
Tp57577_TGAC_v2_gene13952 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 25981801-25982800 Trifolium pratense
Tp57577_TGAC_v2_gene13952 1.0kb downstream 1.0kb downstream 5499 true Tp57577_TGAC_v2_LG7: 25982801-25988299 Trifolium pratense
Tp57577_TGAC_v2_gene13952 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 25987300-25988299 Trifolium pratense
Tp57577_TGAC_v2_gene13952 2.0kb upstream 2.0kb upstream 6499 true Tp57577_TGAC_v2_LG7: 25980801-25987299 Trifolium pratense
Tp57577_TGAC_v2_gene13952 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 25980801-25982800 Trifolium pratense
Tp57577_TGAC_v2_gene13952 2.0kb downstream 2.0kb downstream 6499 true Tp57577_TGAC_v2_LG7: 25982801-25989299 Trifolium pratense
Tp57577_TGAC_v2_gene13952 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 25987300-25989299 Trifolium pratense
Tp57577_TGAC_v2_gene13952 5.0kb upstream 5.0kb upstream 9499 true Tp57577_TGAC_v2_LG7: 25977801-25987299 Trifolium pratense
Tp57577_TGAC_v2_gene13952 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 25977801-25982800 Trifolium pratense
Tp57577_TGAC_v2_gene13952 5.0kb downstream 5.0kb downstream 9499 true Tp57577_TGAC_v2_LG7: 25982801-25992299 Trifolium pratense
Tp57577_TGAC_v2_gene13952 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 25987300-25992299 Trifolium pratense
Tp57577_TGAC_v2_gene13952 10.0kb upstream 10.0kb upstream 14499 true Tp57577_TGAC_v2_LG7: 25972801-25987299 Trifolium pratense
Tp57577_TGAC_v2_gene13952 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 25972801-25982800 Trifolium pratense
Tp57577_TGAC_v2_gene13952 10.0kb downstream 10.0kb downstream 14499 true Tp57577_TGAC_v2_LG7: 25982801-25997299 Trifolium pratense
Tp57577_TGAC_v2_gene13952 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 25987300-25997299 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303635 5265 Fabidae View MSA
124050452 5270 Rosid View MSA
123740427 5271 Pentapetalae View MSA
122787220 5272 Eudicot View MSA
122051227 5273 Angiosperm View MSA
121345426 5274 Embryophyte View MSA
123424899 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain