Gene : Tp57577_TGAC_v2_gene13938 T. pratense v2
Defline:  (1 of 1) PTHR31165:SF9 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 7-RELATED Genomic Order:  2918
Name:  ? Tp57577_TGAC_v2_gene13938 Secondary Identifier:  ? PAC:35955189
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13938 0.5kb upstream 0.5kb upstream 3930 true Tp57577_TGAC_v2_LG7: 26002160-26006089 Trifolium pratense
Tp57577_TGAC_v2_gene13938 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 26005590-26006089 Trifolium pratense
Tp57577_TGAC_v2_gene13938 0.5kb downstream 0.5kb downstream 3930 true Tp57577_TGAC_v2_LG7: 26001660-26005589 Trifolium pratense
Tp57577_TGAC_v2_gene13938 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 26001660-26002159 Trifolium pratense
Tp57577_TGAC_v2_gene13938 1.0kb upstream 1.0kb upstream 4430 true Tp57577_TGAC_v2_LG7: 26002160-26006589 Trifolium pratense
Tp57577_TGAC_v2_gene13938 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 26005590-26006589 Trifolium pratense
Tp57577_TGAC_v2_gene13938 1.0kb downstream 1.0kb downstream 4430 true Tp57577_TGAC_v2_LG7: 26001160-26005589 Trifolium pratense
Tp57577_TGAC_v2_gene13938 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 26001160-26002159 Trifolium pratense
Tp57577_TGAC_v2_gene13938 2.0kb upstream 2.0kb upstream 5430 true Tp57577_TGAC_v2_LG7: 26002160-26007589 Trifolium pratense
Tp57577_TGAC_v2_gene13938 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 26005590-26007589 Trifolium pratense
Tp57577_TGAC_v2_gene13938 2.0kb downstream 2.0kb downstream 5430 true Tp57577_TGAC_v2_LG7: 26000160-26005589 Trifolium pratense
Tp57577_TGAC_v2_gene13938 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 26000160-26002159 Trifolium pratense
Tp57577_TGAC_v2_gene13938 5.0kb upstream 5.0kb upstream 8430 true Tp57577_TGAC_v2_LG7: 26002160-26010589 Trifolium pratense
Tp57577_TGAC_v2_gene13938 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 26005590-26010589 Trifolium pratense
Tp57577_TGAC_v2_gene13938 5.0kb downstream 5.0kb downstream 8430 true Tp57577_TGAC_v2_LG7: 25997160-26005589 Trifolium pratense
Tp57577_TGAC_v2_gene13938 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 25997160-26002159 Trifolium pratense
Tp57577_TGAC_v2_gene13938 10.0kb upstream 10.0kb upstream 13430 true Tp57577_TGAC_v2_LG7: 26002160-26015589 Trifolium pratense
Tp57577_TGAC_v2_gene13938 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 26005590-26015589 Trifolium pratense
Tp57577_TGAC_v2_gene13938 10.0kb downstream 10.0kb downstream 13430 true Tp57577_TGAC_v2_LG7: 25992160-26005589 Trifolium pratense
Tp57577_TGAC_v2_gene13938 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 25992160-26002159 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792183 5273 Angiosperm View MSA
122313647 5265 Fabidae View MSA
124074351 5270 Rosid View MSA
123750207 5271 Pentapetalae View MSA
122796804 5272 Eudicot View MSA
121063429 5274 Embryophyte View MSA
123103178 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain