Gene : Tp57577_TGAC_v2_gene16471 T. pratense v2
Defline:  (1 of 2) PTHR10791//PTHR10791:SF57 - RAG1-ACTIVATING PROTEIN 1 // SUBFAMILY NOT NAMED Genomic Order:  1500
Name:  ? Tp57577_TGAC_v2_gene16471 Secondary Identifier:  ? PAC:35957127
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16471 0.5kb upstream 0.5kb upstream 2753 true Tp57577_TGAC_v2_LG7: 11902244-11904996 Trifolium pratense
Tp57577_TGAC_v2_gene16471 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 11902244-11902743 Trifolium pratense
Tp57577_TGAC_v2_gene16471 0.5kb downstream 0.5kb downstream 2753 true Tp57577_TGAC_v2_LG7: 11902744-11905496 Trifolium pratense
Tp57577_TGAC_v2_gene16471 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 11904997-11905496 Trifolium pratense
Tp57577_TGAC_v2_gene16471 1.0kb upstream 1.0kb upstream 3253 true Tp57577_TGAC_v2_LG7: 11901744-11904996 Trifolium pratense
Tp57577_TGAC_v2_gene16471 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 11901744-11902743 Trifolium pratense
Tp57577_TGAC_v2_gene16471 1.0kb downstream 1.0kb downstream 3253 true Tp57577_TGAC_v2_LG7: 11902744-11905996 Trifolium pratense
Tp57577_TGAC_v2_gene16471 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 11904997-11905996 Trifolium pratense
Tp57577_TGAC_v2_gene16471 2.0kb upstream 2.0kb upstream 4253 true Tp57577_TGAC_v2_LG7: 11900744-11904996 Trifolium pratense
Tp57577_TGAC_v2_gene16471 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 11900744-11902743 Trifolium pratense
Tp57577_TGAC_v2_gene16471 2.0kb downstream 2.0kb downstream 4253 true Tp57577_TGAC_v2_LG7: 11902744-11906996 Trifolium pratense
Tp57577_TGAC_v2_gene16471 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 11904997-11906996 Trifolium pratense
Tp57577_TGAC_v2_gene16471 5.0kb upstream 5.0kb upstream 7253 true Tp57577_TGAC_v2_LG7: 11897744-11904996 Trifolium pratense
Tp57577_TGAC_v2_gene16471 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 11897744-11902743 Trifolium pratense
Tp57577_TGAC_v2_gene16471 5.0kb downstream 5.0kb downstream 7253 true Tp57577_TGAC_v2_LG7: 11902744-11909996 Trifolium pratense
Tp57577_TGAC_v2_gene16471 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 11904997-11909996 Trifolium pratense
Tp57577_TGAC_v2_gene16471 10.0kb upstream 10.0kb upstream 12253 true Tp57577_TGAC_v2_LG7: 11892744-11904996 Trifolium pratense
Tp57577_TGAC_v2_gene16471 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 11892744-11902743 Trifolium pratense
Tp57577_TGAC_v2_gene16471 10.0kb downstream 10.0kb downstream 12253 true Tp57577_TGAC_v2_LG7: 11902744-11914996 Trifolium pratense
Tp57577_TGAC_v2_gene16471 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 11904997-11914996 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311090 5265 Fabidae View MSA
124072962 5270 Rosid View MSA
123749486 5271 Pentapetalae View MSA
122796562 5272 Eudicot View MSA
122048091 5273 Angiosperm View MSA
121310847 5274 Embryophyte View MSA
123348232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain