Gene : Tp57577_TGAC_v2_gene16474 T. pratense v2
Defline:  (1 of 1) PTHR11801 - SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION Genomic Order:  1511
Name:  ? Tp57577_TGAC_v2_gene16474 Secondary Identifier:  ? PAC:35955102
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16474 0.5kb upstream 0.5kb upstream 11913 true Tp57577_TGAC_v2_LG7: 11983608-11995520 Trifolium pratense
Tp57577_TGAC_v2_gene16474 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 11983608-11984107 Trifolium pratense
Tp57577_TGAC_v2_gene16474 0.5kb downstream 0.5kb downstream 11913 true Tp57577_TGAC_v2_LG7: 11984108-11996020 Trifolium pratense
Tp57577_TGAC_v2_gene16474 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 11995521-11996020 Trifolium pratense
Tp57577_TGAC_v2_gene16474 1.0kb upstream 1.0kb upstream 12413 true Tp57577_TGAC_v2_LG7: 11983108-11995520 Trifolium pratense
Tp57577_TGAC_v2_gene16474 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 11983108-11984107 Trifolium pratense
Tp57577_TGAC_v2_gene16474 1.0kb downstream 1.0kb downstream 12413 true Tp57577_TGAC_v2_LG7: 11984108-11996520 Trifolium pratense
Tp57577_TGAC_v2_gene16474 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 11995521-11996520 Trifolium pratense
Tp57577_TGAC_v2_gene16474 2.0kb upstream 2.0kb upstream 13413 true Tp57577_TGAC_v2_LG7: 11982108-11995520 Trifolium pratense
Tp57577_TGAC_v2_gene16474 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 11982108-11984107 Trifolium pratense
Tp57577_TGAC_v2_gene16474 2.0kb downstream 2.0kb downstream 13413 true Tp57577_TGAC_v2_LG7: 11984108-11997520 Trifolium pratense
Tp57577_TGAC_v2_gene16474 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 11995521-11997520 Trifolium pratense
Tp57577_TGAC_v2_gene16474 5.0kb upstream 5.0kb upstream 16413 true Tp57577_TGAC_v2_LG7: 11979108-11995520 Trifolium pratense
Tp57577_TGAC_v2_gene16474 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 11979108-11984107 Trifolium pratense
Tp57577_TGAC_v2_gene16474 5.0kb downstream 5.0kb downstream 16413 true Tp57577_TGAC_v2_LG7: 11984108-12000520 Trifolium pratense
Tp57577_TGAC_v2_gene16474 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 11995521-12000520 Trifolium pratense
Tp57577_TGAC_v2_gene16474 10.0kb upstream 10.0kb upstream 21413 true Tp57577_TGAC_v2_LG7: 11974108-11995520 Trifolium pratense
Tp57577_TGAC_v2_gene16474 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 11974108-11984107 Trifolium pratense
Tp57577_TGAC_v2_gene16474 10.0kb downstream 10.0kb downstream 21413 true Tp57577_TGAC_v2_LG7: 11984108-12005520 Trifolium pratense
Tp57577_TGAC_v2_gene16474 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 11995521-12005520 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300648 5265 Fabidae View MSA
124067056 5270 Rosid View MSA
123736368 5271 Pentapetalae View MSA
122785651 5272 Eudicot View MSA
122044134 5273 Angiosperm View MSA
121347247 5274 Embryophyte View MSA
123380519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain