Gene : Tp57577_TGAC_v2_gene19875 T. pratense v2
Defline:  (1 of 2) PF00954//PF01453//PF07714 - S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) Genomic Order:  2311
Name:  ? Tp57577_TGAC_v2_gene19875 Secondary Identifier:  ? PAC:35955616
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene19875 0.5kb upstream 0.5kb upstream 3843 true Tp57577_TGAC_v2_LG7: 20100545-20104387 Trifolium pratense
Tp57577_TGAC_v2_gene19875 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 20103888-20104387 Trifolium pratense
Tp57577_TGAC_v2_gene19875 0.5kb downstream 0.5kb downstream 3843 true Tp57577_TGAC_v2_LG7: 20100045-20103887 Trifolium pratense
Tp57577_TGAC_v2_gene19875 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 20100045-20100544 Trifolium pratense
Tp57577_TGAC_v2_gene19875 1.0kb upstream 1.0kb upstream 4343 true Tp57577_TGAC_v2_LG7: 20100545-20104887 Trifolium pratense
Tp57577_TGAC_v2_gene19875 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 20103888-20104887 Trifolium pratense
Tp57577_TGAC_v2_gene19875 1.0kb downstream 1.0kb downstream 4343 true Tp57577_TGAC_v2_LG7: 20099545-20103887 Trifolium pratense
Tp57577_TGAC_v2_gene19875 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 20099545-20100544 Trifolium pratense
Tp57577_TGAC_v2_gene19875 2.0kb upstream 2.0kb upstream 5343 true Tp57577_TGAC_v2_LG7: 20100545-20105887 Trifolium pratense
Tp57577_TGAC_v2_gene19875 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 20103888-20105887 Trifolium pratense
Tp57577_TGAC_v2_gene19875 2.0kb downstream 2.0kb downstream 5343 true Tp57577_TGAC_v2_LG7: 20098545-20103887 Trifolium pratense
Tp57577_TGAC_v2_gene19875 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 20098545-20100544 Trifolium pratense
Tp57577_TGAC_v2_gene19875 5.0kb upstream 5.0kb upstream 8343 true Tp57577_TGAC_v2_LG7: 20100545-20108887 Trifolium pratense
Tp57577_TGAC_v2_gene19875 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 20103888-20108887 Trifolium pratense
Tp57577_TGAC_v2_gene19875 5.0kb downstream 5.0kb downstream 8343 true Tp57577_TGAC_v2_LG7: 20095545-20103887 Trifolium pratense
Tp57577_TGAC_v2_gene19875 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 20095545-20100544 Trifolium pratense
Tp57577_TGAC_v2_gene19875 10.0kb upstream 10.0kb upstream 13343 true Tp57577_TGAC_v2_LG7: 20100545-20113887 Trifolium pratense
Tp57577_TGAC_v2_gene19875 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 20103888-20113887 Trifolium pratense
Tp57577_TGAC_v2_gene19875 10.0kb downstream 10.0kb downstream 13343 true Tp57577_TGAC_v2_LG7: 20090545-20103887 Trifolium pratense
Tp57577_TGAC_v2_gene19875 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 20090545-20100544 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304204 5265 Fabidae View MSA
124071642 5270 Rosid View MSA
123744594 5271 Pentapetalae View MSA
122788132 5272 Eudicot View MSA
122046776 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain