Gene : Tp57577_TGAC_v2_gene19156 T. pratense v2
Defline:  (1 of 1) K09753 - cinnamoyl-CoA reductase (CCR) Genomic Order:  2470
Name:  ? Tp57577_TGAC_v2_gene19156 Secondary Identifier:  ? PAC:35956392
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-361 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene19156 0.5kb upstream 0.5kb upstream 3443 true Tp57577_TGAC_v2_LG7: 21789989-21793431 Trifolium pratense
Tp57577_TGAC_v2_gene19156 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 21792932-21793431 Trifolium pratense
Tp57577_TGAC_v2_gene19156 0.5kb downstream 0.5kb downstream 3443 true Tp57577_TGAC_v2_LG7: 21789489-21792931 Trifolium pratense
Tp57577_TGAC_v2_gene19156 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 21789489-21789988 Trifolium pratense
Tp57577_TGAC_v2_gene19156 1.0kb upstream 1.0kb upstream 3943 true Tp57577_TGAC_v2_LG7: 21789989-21793931 Trifolium pratense
Tp57577_TGAC_v2_gene19156 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 21792932-21793931 Trifolium pratense
Tp57577_TGAC_v2_gene19156 1.0kb downstream 1.0kb downstream 3943 true Tp57577_TGAC_v2_LG7: 21788989-21792931 Trifolium pratense
Tp57577_TGAC_v2_gene19156 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 21788989-21789988 Trifolium pratense
Tp57577_TGAC_v2_gene19156 2.0kb upstream 2.0kb upstream 4943 true Tp57577_TGAC_v2_LG7: 21789989-21794931 Trifolium pratense
Tp57577_TGAC_v2_gene19156 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 21792932-21794931 Trifolium pratense
Tp57577_TGAC_v2_gene19156 2.0kb downstream 2.0kb downstream 4943 true Tp57577_TGAC_v2_LG7: 21787989-21792931 Trifolium pratense
Tp57577_TGAC_v2_gene19156 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 21787989-21789988 Trifolium pratense
Tp57577_TGAC_v2_gene19156 5.0kb upstream 5.0kb upstream 7943 true Tp57577_TGAC_v2_LG7: 21789989-21797931 Trifolium pratense
Tp57577_TGAC_v2_gene19156 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 21792932-21797931 Trifolium pratense
Tp57577_TGAC_v2_gene19156 5.0kb downstream 5.0kb downstream 7943 true Tp57577_TGAC_v2_LG7: 21784989-21792931 Trifolium pratense
Tp57577_TGAC_v2_gene19156 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 21784989-21789988 Trifolium pratense
Tp57577_TGAC_v2_gene19156 10.0kb upstream 10.0kb upstream 12943 true Tp57577_TGAC_v2_LG7: 21789989-21802931 Trifolium pratense
Tp57577_TGAC_v2_gene19156 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 21792932-21802931 Trifolium pratense
Tp57577_TGAC_v2_gene19156 10.0kb downstream 10.0kb downstream 12943 true Tp57577_TGAC_v2_LG7: 21779989-21792931 Trifolium pratense
Tp57577_TGAC_v2_gene19156 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 21779989-21789988 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041043 5273 Angiosperm View MSA
122310624 5265 Fabidae View MSA
124063767 5270 Rosid View MSA
123748181 5271 Pentapetalae View MSA
122792644 5272 Eudicot View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain