Gene : Tp57577_TGAC_v2_gene1878 T. pratense v2
Defline:  (1 of 1) K11159 - carotenoid cleavage dioxygenase (K11159) Genomic Order:  2081
Name:  ? Tp57577_TGAC_v2_gene1878 Secondary Identifier:  ? PAC:35957781
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1878 0.5kb upstream 0.5kb upstream 7145 true Tp57577_TGAC_v2_LG7: 17636265-17643409 Trifolium pratense
Tp57577_TGAC_v2_gene1878 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 17642910-17643409 Trifolium pratense
Tp57577_TGAC_v2_gene1878 0.5kb downstream 0.5kb downstream 7145 true Tp57577_TGAC_v2_LG7: 17635765-17642909 Trifolium pratense
Tp57577_TGAC_v2_gene1878 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 17635765-17636264 Trifolium pratense
Tp57577_TGAC_v2_gene1878 1.0kb upstream 1.0kb upstream 7645 true Tp57577_TGAC_v2_LG7: 17636265-17643909 Trifolium pratense
Tp57577_TGAC_v2_gene1878 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 17642910-17643909 Trifolium pratense
Tp57577_TGAC_v2_gene1878 1.0kb downstream 1.0kb downstream 7645 true Tp57577_TGAC_v2_LG7: 17635265-17642909 Trifolium pratense
Tp57577_TGAC_v2_gene1878 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 17635265-17636264 Trifolium pratense
Tp57577_TGAC_v2_gene1878 2.0kb upstream 2.0kb upstream 8645 true Tp57577_TGAC_v2_LG7: 17636265-17644909 Trifolium pratense
Tp57577_TGAC_v2_gene1878 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 17642910-17644909 Trifolium pratense
Tp57577_TGAC_v2_gene1878 2.0kb downstream 2.0kb downstream 8645 true Tp57577_TGAC_v2_LG7: 17634265-17642909 Trifolium pratense
Tp57577_TGAC_v2_gene1878 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 17634265-17636264 Trifolium pratense
Tp57577_TGAC_v2_gene1878 5.0kb upstream 5.0kb upstream 11645 true Tp57577_TGAC_v2_LG7: 17636265-17647909 Trifolium pratense
Tp57577_TGAC_v2_gene1878 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 17642910-17647909 Trifolium pratense
Tp57577_TGAC_v2_gene1878 5.0kb downstream 5.0kb downstream 11645 true Tp57577_TGAC_v2_LG7: 17631265-17642909 Trifolium pratense
Tp57577_TGAC_v2_gene1878 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 17631265-17636264 Trifolium pratense
Tp57577_TGAC_v2_gene1878 10.0kb upstream 10.0kb upstream 16645 true Tp57577_TGAC_v2_LG7: 17636265-17652909 Trifolium pratense
Tp57577_TGAC_v2_gene1878 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 17642910-17652909 Trifolium pratense
Tp57577_TGAC_v2_gene1878 10.0kb downstream 10.0kb downstream 16645 true Tp57577_TGAC_v2_LG7: 17626265-17642909 Trifolium pratense
Tp57577_TGAC_v2_gene1878 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 17626265-17636264 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305426 5265 Fabidae View MSA
124065010 5270 Rosid View MSA
123749061 5271 Pentapetalae View MSA
122787138 5272 Eudicot View MSA
122045403 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain