Gene : Tp57577_TGAC_v2_gene2508 T. pratense v2
Defline:  (1 of 1) PTHR23151:SF56 - DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 1 OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL Genomic Order:  1669
Name:  ? Tp57577_TGAC_v2_gene2508 Secondary Identifier:  ? PAC:35956830
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5173 Trifolium pratense pathologic  
Tpratense PWY-5464 Trifolium pratense pathologic  
Tpratense PYRUVDEHYD-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2508 0.5kb upstream 0.5kb upstream 13560 true Tp57577_TGAC_v2_LG7: 13653180-13666739 Trifolium pratense
Tp57577_TGAC_v2_gene2508 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 13666240-13666739 Trifolium pratense
Tp57577_TGAC_v2_gene2508 0.5kb downstream 0.5kb downstream 13560 true Tp57577_TGAC_v2_LG7: 13652680-13666239 Trifolium pratense
Tp57577_TGAC_v2_gene2508 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 13652680-13653179 Trifolium pratense
Tp57577_TGAC_v2_gene2508 1.0kb upstream 1.0kb upstream 14060 true Tp57577_TGAC_v2_LG7: 13653180-13667239 Trifolium pratense
Tp57577_TGAC_v2_gene2508 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 13666240-13667239 Trifolium pratense
Tp57577_TGAC_v2_gene2508 1.0kb downstream 1.0kb downstream 14060 true Tp57577_TGAC_v2_LG7: 13652180-13666239 Trifolium pratense
Tp57577_TGAC_v2_gene2508 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 13652180-13653179 Trifolium pratense
Tp57577_TGAC_v2_gene2508 2.0kb upstream 2.0kb upstream 15060 true Tp57577_TGAC_v2_LG7: 13653180-13668239 Trifolium pratense
Tp57577_TGAC_v2_gene2508 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 13666240-13668239 Trifolium pratense
Tp57577_TGAC_v2_gene2508 2.0kb downstream 2.0kb downstream 15060 true Tp57577_TGAC_v2_LG7: 13651180-13666239 Trifolium pratense
Tp57577_TGAC_v2_gene2508 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 13651180-13653179 Trifolium pratense
Tp57577_TGAC_v2_gene2508 5.0kb upstream 5.0kb upstream 18060 true Tp57577_TGAC_v2_LG7: 13653180-13671239 Trifolium pratense
Tp57577_TGAC_v2_gene2508 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 13666240-13671239 Trifolium pratense
Tp57577_TGAC_v2_gene2508 5.0kb downstream 5.0kb downstream 18060 true Tp57577_TGAC_v2_LG7: 13648180-13666239 Trifolium pratense
Tp57577_TGAC_v2_gene2508 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 13648180-13653179 Trifolium pratense
Tp57577_TGAC_v2_gene2508 10.0kb upstream 10.0kb upstream 23060 true Tp57577_TGAC_v2_LG7: 13653180-13676239 Trifolium pratense
Tp57577_TGAC_v2_gene2508 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 13666240-13676239 Trifolium pratense
Tp57577_TGAC_v2_gene2508 10.0kb downstream 10.0kb downstream 23060 true Tp57577_TGAC_v2_LG7: 13643180-13666239 Trifolium pratense
Tp57577_TGAC_v2_gene2508 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 13643180-13653179 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040991 5273 Angiosperm View MSA
122303087 5265 Fabidae View MSA
124066791 5270 Rosid View MSA
123740075 5271 Pentapetalae View MSA
122787937 5272 Eudicot View MSA
121346587 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain