Gene : Tp57577_TGAC_v2_gene27813 T. pratense v2
Defline:  (1 of 1) PF00628//PF05641//PF13839//PF14416//PF16135 - PHD-finger (PHD) // Agenet domain (Agenet) // GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) // TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  1574
Name:  ? Tp57577_TGAC_v2_gene27813 Secondary Identifier:  ? PAC:35955210
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene27813 0.5kb upstream 0.5kb upstream 8410 true Tp57577_TGAC_v2_LG7: 12725153-12733562 Trifolium pratense
Tp57577_TGAC_v2_gene27813 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 12733063-12733562 Trifolium pratense
Tp57577_TGAC_v2_gene27813 0.5kb downstream 0.5kb downstream 8410 true Tp57577_TGAC_v2_LG7: 12724653-12733062 Trifolium pratense
Tp57577_TGAC_v2_gene27813 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 12724653-12725152 Trifolium pratense
Tp57577_TGAC_v2_gene27813 1.0kb upstream 1.0kb upstream 8910 true Tp57577_TGAC_v2_LG7: 12725153-12734062 Trifolium pratense
Tp57577_TGAC_v2_gene27813 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 12733063-12734062 Trifolium pratense
Tp57577_TGAC_v2_gene27813 1.0kb downstream 1.0kb downstream 8910 true Tp57577_TGAC_v2_LG7: 12724153-12733062 Trifolium pratense
Tp57577_TGAC_v2_gene27813 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 12724153-12725152 Trifolium pratense
Tp57577_TGAC_v2_gene27813 2.0kb upstream 2.0kb upstream 9910 true Tp57577_TGAC_v2_LG7: 12725153-12735062 Trifolium pratense
Tp57577_TGAC_v2_gene27813 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 12733063-12735062 Trifolium pratense
Tp57577_TGAC_v2_gene27813 2.0kb downstream 2.0kb downstream 9910 true Tp57577_TGAC_v2_LG7: 12723153-12733062 Trifolium pratense
Tp57577_TGAC_v2_gene27813 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 12723153-12725152 Trifolium pratense
Tp57577_TGAC_v2_gene27813 5.0kb upstream 5.0kb upstream 12910 true Tp57577_TGAC_v2_LG7: 12725153-12738062 Trifolium pratense
Tp57577_TGAC_v2_gene27813 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 12733063-12738062 Trifolium pratense
Tp57577_TGAC_v2_gene27813 5.0kb downstream 5.0kb downstream 12910 true Tp57577_TGAC_v2_LG7: 12720153-12733062 Trifolium pratense
Tp57577_TGAC_v2_gene27813 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 12720153-12725152 Trifolium pratense
Tp57577_TGAC_v2_gene27813 10.0kb upstream 10.0kb upstream 17910 true Tp57577_TGAC_v2_LG7: 12725153-12743062 Trifolium pratense
Tp57577_TGAC_v2_gene27813 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 12733063-12743062 Trifolium pratense
Tp57577_TGAC_v2_gene27813 10.0kb downstream 10.0kb downstream 17910 true Tp57577_TGAC_v2_LG7: 12715153-12733062 Trifolium pratense
Tp57577_TGAC_v2_gene27813 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 12715153-12725152 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312419 5265 Fabidae View MSA
124072957 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain