Gene : Tp57577_TGAC_v2_gene2549 T. pratense v2
Defline:  (1 of 2) 2.7.8.7 - Holo-[acyl-carrier-protein] synthase / PPTase Genomic Order:  1627
Name:  ? Tp57577_TGAC_v2_gene2549 Secondary Identifier:  ? PAC:35957835
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6012-1 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2549 0.5kb upstream 0.5kb upstream 4512 true Tp57577_TGAC_v2_LG7: 13230997-13235508 Trifolium pratense
Tp57577_TGAC_v2_gene2549 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 13235009-13235508 Trifolium pratense
Tp57577_TGAC_v2_gene2549 0.5kb downstream 0.5kb downstream 4512 true Tp57577_TGAC_v2_LG7: 13230497-13235008 Trifolium pratense
Tp57577_TGAC_v2_gene2549 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 13230497-13230996 Trifolium pratense
Tp57577_TGAC_v2_gene2549 1.0kb upstream 1.0kb upstream 5012 true Tp57577_TGAC_v2_LG7: 13230997-13236008 Trifolium pratense
Tp57577_TGAC_v2_gene2549 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 13235009-13236008 Trifolium pratense
Tp57577_TGAC_v2_gene2549 1.0kb downstream 1.0kb downstream 5012 true Tp57577_TGAC_v2_LG7: 13229997-13235008 Trifolium pratense
Tp57577_TGAC_v2_gene2549 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 13229997-13230996 Trifolium pratense
Tp57577_TGAC_v2_gene2549 2.0kb upstream 2.0kb upstream 6012 true Tp57577_TGAC_v2_LG7: 13230997-13237008 Trifolium pratense
Tp57577_TGAC_v2_gene2549 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 13235009-13237008 Trifolium pratense
Tp57577_TGAC_v2_gene2549 2.0kb downstream 2.0kb downstream 6012 true Tp57577_TGAC_v2_LG7: 13228997-13235008 Trifolium pratense
Tp57577_TGAC_v2_gene2549 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 13228997-13230996 Trifolium pratense
Tp57577_TGAC_v2_gene2549 5.0kb upstream 5.0kb upstream 9012 true Tp57577_TGAC_v2_LG7: 13230997-13240008 Trifolium pratense
Tp57577_TGAC_v2_gene2549 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 13235009-13240008 Trifolium pratense
Tp57577_TGAC_v2_gene2549 5.0kb downstream 5.0kb downstream 9012 true Tp57577_TGAC_v2_LG7: 13225997-13235008 Trifolium pratense
Tp57577_TGAC_v2_gene2549 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 13225997-13230996 Trifolium pratense
Tp57577_TGAC_v2_gene2549 10.0kb upstream 10.0kb upstream 14012 true Tp57577_TGAC_v2_LG7: 13230997-13245008 Trifolium pratense
Tp57577_TGAC_v2_gene2549 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 13235009-13245008 Trifolium pratense
Tp57577_TGAC_v2_gene2549 10.0kb downstream 10.0kb downstream 14012 true Tp57577_TGAC_v2_LG7: 13220997-13235008 Trifolium pratense
Tp57577_TGAC_v2_gene2549 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 13220997-13230996 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308786 5265 Fabidae View MSA
124062449 5270 Rosid View MSA
123736560 5271 Pentapetalae View MSA
122793006 5272 Eudicot View MSA
122041832 5273 Angiosperm View MSA
123429078 5275 Viridiplantae View MSA
121344089 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain