Gene : Tp57577_TGAC_v2_gene31767 T. pratense v2
Defline:  (1 of 2) 1.13.11.12//1.13.11.58 - Linoleate 13S-lipoxygenase / Lipoxidase // Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  1357
Name:  ? Tp57577_TGAC_v2_gene31767 Secondary Identifier:  ? PAC:35955848
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5409 Trifolium pratense pathologic  
Tpratense PWY-5410 Trifolium pratense pathologic  
Tpratense PWY-735 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene31767 0.5kb upstream 0.5kb upstream 8145 true Tp57577_TGAC_v2_LG7: 10579785-10587929 Trifolium pratense
Tp57577_TGAC_v2_gene31767 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 10587430-10587929 Trifolium pratense
Tp57577_TGAC_v2_gene31767 0.5kb downstream 0.5kb downstream 8145 true Tp57577_TGAC_v2_LG7: 10579285-10587429 Trifolium pratense
Tp57577_TGAC_v2_gene31767 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 10579285-10579784 Trifolium pratense
Tp57577_TGAC_v2_gene31767 1.0kb upstream 1.0kb upstream 8645 true Tp57577_TGAC_v2_LG7: 10579785-10588429 Trifolium pratense
Tp57577_TGAC_v2_gene31767 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 10587430-10588429 Trifolium pratense
Tp57577_TGAC_v2_gene31767 1.0kb downstream 1.0kb downstream 8645 true Tp57577_TGAC_v2_LG7: 10578785-10587429 Trifolium pratense
Tp57577_TGAC_v2_gene31767 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 10578785-10579784 Trifolium pratense
Tp57577_TGAC_v2_gene31767 2.0kb upstream 2.0kb upstream 9645 true Tp57577_TGAC_v2_LG7: 10579785-10589429 Trifolium pratense
Tp57577_TGAC_v2_gene31767 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 10587430-10589429 Trifolium pratense
Tp57577_TGAC_v2_gene31767 2.0kb downstream 2.0kb downstream 9645 true Tp57577_TGAC_v2_LG7: 10577785-10587429 Trifolium pratense
Tp57577_TGAC_v2_gene31767 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 10577785-10579784 Trifolium pratense
Tp57577_TGAC_v2_gene31767 5.0kb upstream 5.0kb upstream 12645 true Tp57577_TGAC_v2_LG7: 10579785-10592429 Trifolium pratense
Tp57577_TGAC_v2_gene31767 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 10587430-10592429 Trifolium pratense
Tp57577_TGAC_v2_gene31767 5.0kb downstream 5.0kb downstream 12645 true Tp57577_TGAC_v2_LG7: 10574785-10587429 Trifolium pratense
Tp57577_TGAC_v2_gene31767 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 10574785-10579784 Trifolium pratense
Tp57577_TGAC_v2_gene31767 10.0kb upstream 10.0kb upstream 17645 true Tp57577_TGAC_v2_LG7: 10579785-10597429 Trifolium pratense
Tp57577_TGAC_v2_gene31767 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 10587430-10597429 Trifolium pratense
Tp57577_TGAC_v2_gene31767 10.0kb downstream 10.0kb downstream 17645 true Tp57577_TGAC_v2_LG7: 10569785-10587429 Trifolium pratense
Tp57577_TGAC_v2_gene31767 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 10569785-10579784 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122793975 5272 Eudicot View MSA
122297154 5265 Fabidae View MSA
124071703 5270 Rosid View MSA
123743828 5271 Pentapetalae View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain