Gene : Tp57577_TGAC_v2_gene3109 T. pratense v2
Defline:  (1 of 1) KOG3358 - Uncharacterized secreted protein SDF2 (Stromal cell-derived factor 2), contains MIR domains Genomic Order:  1463
Name:  ? Tp57577_TGAC_v2_gene3109 Secondary Identifier:  ? PAC:35955323
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3109 0.5kb upstream 0.5kb upstream 3758 true Tp57577_TGAC_v2_LG7: 11528959-11532716 Trifolium pratense
Tp57577_TGAC_v2_gene3109 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 11532217-11532716 Trifolium pratense
Tp57577_TGAC_v2_gene3109 0.5kb downstream 0.5kb downstream 3758 true Tp57577_TGAC_v2_LG7: 11528459-11532216 Trifolium pratense
Tp57577_TGAC_v2_gene3109 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 11528459-11528958 Trifolium pratense
Tp57577_TGAC_v2_gene3109 1.0kb upstream 1.0kb upstream 4258 true Tp57577_TGAC_v2_LG7: 11528959-11533216 Trifolium pratense
Tp57577_TGAC_v2_gene3109 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 11532217-11533216 Trifolium pratense
Tp57577_TGAC_v2_gene3109 1.0kb downstream 1.0kb downstream 4258 true Tp57577_TGAC_v2_LG7: 11527959-11532216 Trifolium pratense
Tp57577_TGAC_v2_gene3109 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 11527959-11528958 Trifolium pratense
Tp57577_TGAC_v2_gene3109 2.0kb upstream 2.0kb upstream 5258 true Tp57577_TGAC_v2_LG7: 11528959-11534216 Trifolium pratense
Tp57577_TGAC_v2_gene3109 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 11532217-11534216 Trifolium pratense
Tp57577_TGAC_v2_gene3109 2.0kb downstream 2.0kb downstream 5258 true Tp57577_TGAC_v2_LG7: 11526959-11532216 Trifolium pratense
Tp57577_TGAC_v2_gene3109 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 11526959-11528958 Trifolium pratense
Tp57577_TGAC_v2_gene3109 5.0kb upstream 5.0kb upstream 8258 true Tp57577_TGAC_v2_LG7: 11528959-11537216 Trifolium pratense
Tp57577_TGAC_v2_gene3109 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 11532217-11537216 Trifolium pratense
Tp57577_TGAC_v2_gene3109 5.0kb downstream 5.0kb downstream 8258 true Tp57577_TGAC_v2_LG7: 11523959-11532216 Trifolium pratense
Tp57577_TGAC_v2_gene3109 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 11523959-11528958 Trifolium pratense
Tp57577_TGAC_v2_gene3109 10.0kb upstream 10.0kb upstream 13258 true Tp57577_TGAC_v2_LG7: 11528959-11542216 Trifolium pratense
Tp57577_TGAC_v2_gene3109 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 11532217-11542216 Trifolium pratense
Tp57577_TGAC_v2_gene3109 10.0kb downstream 10.0kb downstream 13258 true Tp57577_TGAC_v2_LG7: 11518959-11532216 Trifolium pratense
Tp57577_TGAC_v2_gene3109 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 11518959-11528958 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299626 5265 Fabidae View MSA
124073869 5270 Rosid View MSA
123747000 5271 Pentapetalae View MSA
122786707 5272 Eudicot View MSA
122043043 5273 Angiosperm View MSA
121348450 5274 Embryophyte View MSA
123428555 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain