Gene : Tp57577_TGAC_v2_gene34321 T. pratense v2
Defline:  (1 of 509) PF13041 - PPR repeat family (PPR_2) Genomic Order:  46
Name:  ? Tp57577_TGAC_v2_gene34321 Secondary Identifier:  ? PAC:35957159
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene34321 0.5kb upstream 0.5kb upstream 4506 true Tp57577_TGAC_v2_LG7: 278797-283302 Trifolium pratense
Tp57577_TGAC_v2_gene34321 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 278797-279296 Trifolium pratense
Tp57577_TGAC_v2_gene34321 0.5kb downstream 0.5kb downstream 4506 true Tp57577_TGAC_v2_LG7: 279297-283802 Trifolium pratense
Tp57577_TGAC_v2_gene34321 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 283303-283802 Trifolium pratense
Tp57577_TGAC_v2_gene34321 1.0kb upstream 1.0kb upstream 5006 true Tp57577_TGAC_v2_LG7: 278297-283302 Trifolium pratense
Tp57577_TGAC_v2_gene34321 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 278297-279296 Trifolium pratense
Tp57577_TGAC_v2_gene34321 1.0kb downstream 1.0kb downstream 5006 true Tp57577_TGAC_v2_LG7: 279297-284302 Trifolium pratense
Tp57577_TGAC_v2_gene34321 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 283303-284302 Trifolium pratense
Tp57577_TGAC_v2_gene34321 2.0kb upstream 2.0kb upstream 6006 true Tp57577_TGAC_v2_LG7: 277297-283302 Trifolium pratense
Tp57577_TGAC_v2_gene34321 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 277297-279296 Trifolium pratense
Tp57577_TGAC_v2_gene34321 2.0kb downstream 2.0kb downstream 6006 true Tp57577_TGAC_v2_LG7: 279297-285302 Trifolium pratense
Tp57577_TGAC_v2_gene34321 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 283303-285302 Trifolium pratense
Tp57577_TGAC_v2_gene34321 5.0kb upstream 5.0kb upstream 9006 true Tp57577_TGAC_v2_LG7: 274297-283302 Trifolium pratense
Tp57577_TGAC_v2_gene34321 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 274297-279296 Trifolium pratense
Tp57577_TGAC_v2_gene34321 5.0kb downstream 5.0kb downstream 9006 true Tp57577_TGAC_v2_LG7: 279297-288302 Trifolium pratense
Tp57577_TGAC_v2_gene34321 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 283303-288302 Trifolium pratense
Tp57577_TGAC_v2_gene34321 10.0kb upstream 10.0kb upstream 14006 true Tp57577_TGAC_v2_LG7: 269297-283302 Trifolium pratense
Tp57577_TGAC_v2_gene34321 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 269297-279296 Trifolium pratense
Tp57577_TGAC_v2_gene34321 10.0kb downstream 10.0kb downstream 14006 true Tp57577_TGAC_v2_LG7: 279297-293302 Trifolium pratense
Tp57577_TGAC_v2_gene34321 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 283303-293302 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305758 5265 Fabidae View MSA
124062524 5270 Rosid View MSA
123736942 5271 Pentapetalae View MSA
122790560 5272 Eudicot View MSA
122046804 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain