Gene : Tp57577_TGAC_v2_gene34543 T. pratense v2
Defline:  (1 of 2) PTHR12300:SF26 - HVA22-LIKE PROTEIN G-RELATED Genomic Order:  1131
Name:  ? Tp57577_TGAC_v2_gene34543 Secondary Identifier:  ? PAC:35958068
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene34543 0.5kb upstream 0.5kb upstream 2531 true Tp57577_TGAC_v2_LG7: 8967710-8970240 Trifolium pratense
Tp57577_TGAC_v2_gene34543 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 8969741-8970240 Trifolium pratense
Tp57577_TGAC_v2_gene34543 0.5kb downstream 0.5kb downstream 2531 true Tp57577_TGAC_v2_LG7: 8967210-8969740 Trifolium pratense
Tp57577_TGAC_v2_gene34543 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 8967210-8967709 Trifolium pratense
Tp57577_TGAC_v2_gene34543 1.0kb upstream 1.0kb upstream 3031 true Tp57577_TGAC_v2_LG7: 8967710-8970740 Trifolium pratense
Tp57577_TGAC_v2_gene34543 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 8969741-8970740 Trifolium pratense
Tp57577_TGAC_v2_gene34543 1.0kb downstream 1.0kb downstream 3031 true Tp57577_TGAC_v2_LG7: 8966710-8969740 Trifolium pratense
Tp57577_TGAC_v2_gene34543 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 8966710-8967709 Trifolium pratense
Tp57577_TGAC_v2_gene34543 2.0kb upstream 2.0kb upstream 4031 true Tp57577_TGAC_v2_LG7: 8967710-8971740 Trifolium pratense
Tp57577_TGAC_v2_gene34543 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 8969741-8971740 Trifolium pratense
Tp57577_TGAC_v2_gene34543 2.0kb downstream 2.0kb downstream 4031 true Tp57577_TGAC_v2_LG7: 8965710-8969740 Trifolium pratense
Tp57577_TGAC_v2_gene34543 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 8965710-8967709 Trifolium pratense
Tp57577_TGAC_v2_gene34543 5.0kb upstream 5.0kb upstream 7031 true Tp57577_TGAC_v2_LG7: 8967710-8974740 Trifolium pratense
Tp57577_TGAC_v2_gene34543 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 8969741-8974740 Trifolium pratense
Tp57577_TGAC_v2_gene34543 5.0kb downstream 5.0kb downstream 7031 true Tp57577_TGAC_v2_LG7: 8962710-8969740 Trifolium pratense
Tp57577_TGAC_v2_gene34543 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 8962710-8967709 Trifolium pratense
Tp57577_TGAC_v2_gene34543 10.0kb upstream 10.0kb upstream 12031 true Tp57577_TGAC_v2_LG7: 8967710-8979740 Trifolium pratense
Tp57577_TGAC_v2_gene34543 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 8969741-8979740 Trifolium pratense
Tp57577_TGAC_v2_gene34543 10.0kb downstream 10.0kb downstream 12031 true Tp57577_TGAC_v2_LG7: 8957710-8969740 Trifolium pratense
Tp57577_TGAC_v2_gene34543 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 8957710-8967709 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122289375 5265 Fabidae View MSA
124068207 5270 Rosid View MSA
123753523 5271 Pentapetalae View MSA
122794920 5272 Eudicot View MSA
122050664 5273 Angiosperm View MSA
121348530 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain