Gene : Tp57577_TGAC_v2_gene33708 T. pratense v2
Defline:  (1 of 1) PF00628//PF13508//PF16135 - PHD-finger (PHD) // Acetyltransferase (GNAT) domain (Acetyltransf_7) // TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  1899
Name:  ? Tp57577_TGAC_v2_gene33708 Secondary Identifier:  ? PAC:35955902
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene33708 0.5kb upstream 0.5kb upstream 3157 true Tp57577_TGAC_v2_LG7: 15572379-15575535 Trifolium pratense
Tp57577_TGAC_v2_gene33708 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 15572379-15572878 Trifolium pratense
Tp57577_TGAC_v2_gene33708 0.5kb downstream 0.5kb downstream 3157 true Tp57577_TGAC_v2_LG7: 15572879-15576035 Trifolium pratense
Tp57577_TGAC_v2_gene33708 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 15575536-15576035 Trifolium pratense
Tp57577_TGAC_v2_gene33708 1.0kb upstream 1.0kb upstream 3657 true Tp57577_TGAC_v2_LG7: 15571879-15575535 Trifolium pratense
Tp57577_TGAC_v2_gene33708 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 15571879-15572878 Trifolium pratense
Tp57577_TGAC_v2_gene33708 1.0kb downstream 1.0kb downstream 3657 true Tp57577_TGAC_v2_LG7: 15572879-15576535 Trifolium pratense
Tp57577_TGAC_v2_gene33708 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 15575536-15576535 Trifolium pratense
Tp57577_TGAC_v2_gene33708 2.0kb upstream 2.0kb upstream 4657 true Tp57577_TGAC_v2_LG7: 15570879-15575535 Trifolium pratense
Tp57577_TGAC_v2_gene33708 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 15570879-15572878 Trifolium pratense
Tp57577_TGAC_v2_gene33708 2.0kb downstream 2.0kb downstream 4657 true Tp57577_TGAC_v2_LG7: 15572879-15577535 Trifolium pratense
Tp57577_TGAC_v2_gene33708 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 15575536-15577535 Trifolium pratense
Tp57577_TGAC_v2_gene33708 5.0kb upstream 5.0kb upstream 7657 true Tp57577_TGAC_v2_LG7: 15567879-15575535 Trifolium pratense
Tp57577_TGAC_v2_gene33708 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 15567879-15572878 Trifolium pratense
Tp57577_TGAC_v2_gene33708 5.0kb downstream 5.0kb downstream 7657 true Tp57577_TGAC_v2_LG7: 15572879-15580535 Trifolium pratense
Tp57577_TGAC_v2_gene33708 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 15575536-15580535 Trifolium pratense
Tp57577_TGAC_v2_gene33708 10.0kb upstream 10.0kb upstream 12657 true Tp57577_TGAC_v2_LG7: 15562879-15575535 Trifolium pratense
Tp57577_TGAC_v2_gene33708 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 15562879-15572878 Trifolium pratense
Tp57577_TGAC_v2_gene33708 10.0kb downstream 10.0kb downstream 12657 true Tp57577_TGAC_v2_LG7: 15572879-15585535 Trifolium pratense
Tp57577_TGAC_v2_gene33708 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 15575536-15585535 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314856 5265 Fabidae View MSA
124072957 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain