Gene : Tp57577_TGAC_v2_gene37277 T. pratense v2
Defline:  (1 of 9) K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Genomic Order:  148
Name:  ? Tp57577_TGAC_v2_gene37277 Secondary Identifier:  ? PAC:35955835
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1081 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene37277 0.5kb upstream 0.5kb upstream 5330 true Tp57577_TGAC_v2_LG7: 1046823-1052152 Trifolium pratense
Tp57577_TGAC_v2_gene37277 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 1051653-1052152 Trifolium pratense
Tp57577_TGAC_v2_gene37277 0.5kb downstream 0.5kb downstream 5330 true Tp57577_TGAC_v2_LG7: 1046323-1051652 Trifolium pratense
Tp57577_TGAC_v2_gene37277 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 1046323-1046822 Trifolium pratense
Tp57577_TGAC_v2_gene37277 1.0kb upstream 1.0kb upstream 5830 true Tp57577_TGAC_v2_LG7: 1046823-1052652 Trifolium pratense
Tp57577_TGAC_v2_gene37277 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 1051653-1052652 Trifolium pratense
Tp57577_TGAC_v2_gene37277 1.0kb downstream 1.0kb downstream 5830 true Tp57577_TGAC_v2_LG7: 1045823-1051652 Trifolium pratense
Tp57577_TGAC_v2_gene37277 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 1045823-1046822 Trifolium pratense
Tp57577_TGAC_v2_gene37277 2.0kb upstream 2.0kb upstream 6830 true Tp57577_TGAC_v2_LG7: 1046823-1053652 Trifolium pratense
Tp57577_TGAC_v2_gene37277 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 1051653-1053652 Trifolium pratense
Tp57577_TGAC_v2_gene37277 2.0kb downstream 2.0kb downstream 6830 true Tp57577_TGAC_v2_LG7: 1044823-1051652 Trifolium pratense
Tp57577_TGAC_v2_gene37277 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 1044823-1046822 Trifolium pratense
Tp57577_TGAC_v2_gene37277 5.0kb upstream 5.0kb upstream 9830 true Tp57577_TGAC_v2_LG7: 1046823-1056652 Trifolium pratense
Tp57577_TGAC_v2_gene37277 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 1051653-1056652 Trifolium pratense
Tp57577_TGAC_v2_gene37277 5.0kb downstream 5.0kb downstream 9830 true Tp57577_TGAC_v2_LG7: 1041823-1051652 Trifolium pratense
Tp57577_TGAC_v2_gene37277 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 1041823-1046822 Trifolium pratense
Tp57577_TGAC_v2_gene37277 10.0kb upstream 10.0kb upstream 14830 true Tp57577_TGAC_v2_LG7: 1046823-1061652 Trifolium pratense
Tp57577_TGAC_v2_gene37277 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 1051653-1061652 Trifolium pratense
Tp57577_TGAC_v2_gene37277 10.0kb downstream 10.0kb downstream 14830 true Tp57577_TGAC_v2_LG7: 1036823-1051652 Trifolium pratense
Tp57577_TGAC_v2_gene37277 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 1036823-1046822 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306699 5265 Fabidae View MSA
124062237 5270 Rosid View MSA
123747899 5271 Pentapetalae View MSA
122789338 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain