Gene : Tp57577_TGAC_v2_gene37171 T. pratense v2
Defline:  (1 of 1) K12197 - charged multivesicular body protein 1 (CHMP1, VPS46, DID2) Genomic Order:  100
Name:  ? Tp57577_TGAC_v2_gene37171 Secondary Identifier:  ? PAC:35958184
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene37171 0.5kb upstream 0.5kb upstream 1775 true Tp57577_TGAC_v2_LG7: 775508-777282 Trifolium pratense
Tp57577_TGAC_v2_gene37171 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 776783-777282 Trifolium pratense
Tp57577_TGAC_v2_gene37171 0.5kb downstream 0.5kb downstream 1775 true Tp57577_TGAC_v2_LG7: 775008-776782 Trifolium pratense
Tp57577_TGAC_v2_gene37171 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 775008-775507 Trifolium pratense
Tp57577_TGAC_v2_gene37171 1.0kb upstream 1.0kb upstream 2275 true Tp57577_TGAC_v2_LG7: 775508-777782 Trifolium pratense
Tp57577_TGAC_v2_gene37171 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 776783-777782 Trifolium pratense
Tp57577_TGAC_v2_gene37171 1.0kb downstream 1.0kb downstream 2275 true Tp57577_TGAC_v2_LG7: 774508-776782 Trifolium pratense
Tp57577_TGAC_v2_gene37171 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 774508-775507 Trifolium pratense
Tp57577_TGAC_v2_gene37171 2.0kb upstream 2.0kb upstream 3275 true Tp57577_TGAC_v2_LG7: 775508-778782 Trifolium pratense
Tp57577_TGAC_v2_gene37171 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 776783-778782 Trifolium pratense
Tp57577_TGAC_v2_gene37171 2.0kb downstream 2.0kb downstream 3275 true Tp57577_TGAC_v2_LG7: 773508-776782 Trifolium pratense
Tp57577_TGAC_v2_gene37171 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 773508-775507 Trifolium pratense
Tp57577_TGAC_v2_gene37171 5.0kb upstream 5.0kb upstream 6275 true Tp57577_TGAC_v2_LG7: 775508-781782 Trifolium pratense
Tp57577_TGAC_v2_gene37171 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 776783-781782 Trifolium pratense
Tp57577_TGAC_v2_gene37171 5.0kb downstream 5.0kb downstream 6275 true Tp57577_TGAC_v2_LG7: 770508-776782 Trifolium pratense
Tp57577_TGAC_v2_gene37171 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 770508-775507 Trifolium pratense
Tp57577_TGAC_v2_gene37171 10.0kb upstream 10.0kb upstream 11275 true Tp57577_TGAC_v2_LG7: 775508-786782 Trifolium pratense
Tp57577_TGAC_v2_gene37171 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 776783-786782 Trifolium pratense
Tp57577_TGAC_v2_gene37171 10.0kb downstream 10.0kb downstream 11275 true Tp57577_TGAC_v2_LG7: 765508-776782 Trifolium pratense
Tp57577_TGAC_v2_gene37171 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 765508-775507 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313767 5265 Fabidae View MSA
124063895 5270 Rosid View MSA
123748216 5271 Pentapetalae View MSA
122794716 5272 Eudicot View MSA
122044262 5273 Angiosperm View MSA
121349635 5274 Embryophyte View MSA
123427092 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain