Gene : Tp57577_TGAC_v2_gene38485 T. pratense v2
Defline:  (1 of 1) PF09011 - HMG-box domain (HMG_box_2) Genomic Order:  414
Name:  ? Tp57577_TGAC_v2_gene38485 Secondary Identifier:  ? PAC:35956292
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38485 0.5kb upstream 0.5kb upstream 2975 true Tp57577_TGAC_v2_LG7: 3148006-3150980 Trifolium pratense
Tp57577_TGAC_v2_gene38485 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 3150481-3150980 Trifolium pratense
Tp57577_TGAC_v2_gene38485 0.5kb downstream 0.5kb downstream 2975 true Tp57577_TGAC_v2_LG7: 3147506-3150480 Trifolium pratense
Tp57577_TGAC_v2_gene38485 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 3147506-3148005 Trifolium pratense
Tp57577_TGAC_v2_gene38485 1.0kb upstream 1.0kb upstream 3475 true Tp57577_TGAC_v2_LG7: 3148006-3151480 Trifolium pratense
Tp57577_TGAC_v2_gene38485 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 3150481-3151480 Trifolium pratense
Tp57577_TGAC_v2_gene38485 1.0kb downstream 1.0kb downstream 3475 true Tp57577_TGAC_v2_LG7: 3147006-3150480 Trifolium pratense
Tp57577_TGAC_v2_gene38485 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 3147006-3148005 Trifolium pratense
Tp57577_TGAC_v2_gene38485 2.0kb upstream 2.0kb upstream 4475 true Tp57577_TGAC_v2_LG7: 3148006-3152480 Trifolium pratense
Tp57577_TGAC_v2_gene38485 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 3150481-3152480 Trifolium pratense
Tp57577_TGAC_v2_gene38485 2.0kb downstream 2.0kb downstream 4475 true Tp57577_TGAC_v2_LG7: 3146006-3150480 Trifolium pratense
Tp57577_TGAC_v2_gene38485 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 3146006-3148005 Trifolium pratense
Tp57577_TGAC_v2_gene38485 5.0kb upstream 5.0kb upstream 7475 true Tp57577_TGAC_v2_LG7: 3148006-3155480 Trifolium pratense
Tp57577_TGAC_v2_gene38485 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 3150481-3155480 Trifolium pratense
Tp57577_TGAC_v2_gene38485 5.0kb downstream 5.0kb downstream 7475 true Tp57577_TGAC_v2_LG7: 3143006-3150480 Trifolium pratense
Tp57577_TGAC_v2_gene38485 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 3143006-3148005 Trifolium pratense
Tp57577_TGAC_v2_gene38485 10.0kb upstream 10.0kb upstream 12475 true Tp57577_TGAC_v2_LG7: 3148006-3160480 Trifolium pratense
Tp57577_TGAC_v2_gene38485 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 3150481-3160480 Trifolium pratense
Tp57577_TGAC_v2_gene38485 10.0kb downstream 10.0kb downstream 12475 true Tp57577_TGAC_v2_LG7: 3138006-3150480 Trifolium pratense
Tp57577_TGAC_v2_gene38485 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 3138006-3148005 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303467 5265 Fabidae View MSA
124064616 5270 Rosid View MSA
123751442 5271 Pentapetalae View MSA
122787834 5272 Eudicot View MSA
122046803 5273 Angiosperm View MSA
121349155 5274 Embryophyte View MSA
123426058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain