Gene : Tp57577_TGAC_v2_gene38570 T. pratense v2
Defline:  (1 of 28) PF01190 - Pollen proteins Ole e I like (Pollen_Ole_e_I) Genomic Order:  316
Name:  ? Tp57577_TGAC_v2_gene38570 Secondary Identifier:  ? PAC:35955904
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38570 0.5kb upstream 0.5kb upstream 2943 true Tp57577_TGAC_v2_LG7: 2380652-2383594 Trifolium pratense
Tp57577_TGAC_v2_gene38570 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 2380652-2381151 Trifolium pratense
Tp57577_TGAC_v2_gene38570 0.5kb downstream 0.5kb downstream 2943 true Tp57577_TGAC_v2_LG7: 2381152-2384094 Trifolium pratense
Tp57577_TGAC_v2_gene38570 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 2383595-2384094 Trifolium pratense
Tp57577_TGAC_v2_gene38570 1.0kb upstream 1.0kb upstream 3443 true Tp57577_TGAC_v2_LG7: 2380152-2383594 Trifolium pratense
Tp57577_TGAC_v2_gene38570 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 2380152-2381151 Trifolium pratense
Tp57577_TGAC_v2_gene38570 1.0kb downstream 1.0kb downstream 3443 true Tp57577_TGAC_v2_LG7: 2381152-2384594 Trifolium pratense
Tp57577_TGAC_v2_gene38570 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 2383595-2384594 Trifolium pratense
Tp57577_TGAC_v2_gene38570 2.0kb upstream 2.0kb upstream 4443 true Tp57577_TGAC_v2_LG7: 2379152-2383594 Trifolium pratense
Tp57577_TGAC_v2_gene38570 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 2379152-2381151 Trifolium pratense
Tp57577_TGAC_v2_gene38570 2.0kb downstream 2.0kb downstream 4443 true Tp57577_TGAC_v2_LG7: 2381152-2385594 Trifolium pratense
Tp57577_TGAC_v2_gene38570 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 2383595-2385594 Trifolium pratense
Tp57577_TGAC_v2_gene38570 5.0kb upstream 5.0kb upstream 7443 true Tp57577_TGAC_v2_LG7: 2376152-2383594 Trifolium pratense
Tp57577_TGAC_v2_gene38570 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 2376152-2381151 Trifolium pratense
Tp57577_TGAC_v2_gene38570 5.0kb downstream 5.0kb downstream 7443 true Tp57577_TGAC_v2_LG7: 2381152-2388594 Trifolium pratense
Tp57577_TGAC_v2_gene38570 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 2383595-2388594 Trifolium pratense
Tp57577_TGAC_v2_gene38570 10.0kb upstream 10.0kb upstream 12443 true Tp57577_TGAC_v2_LG7: 2371152-2383594 Trifolium pratense
Tp57577_TGAC_v2_gene38570 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 2371152-2381151 Trifolium pratense
Tp57577_TGAC_v2_gene38570 10.0kb downstream 10.0kb downstream 12443 true Tp57577_TGAC_v2_LG7: 2381152-2393594 Trifolium pratense
Tp57577_TGAC_v2_gene38570 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 2383595-2393594 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302393 5265 Fabidae View MSA
124061296 5270 Rosid View MSA
123747098 5271 Pentapetalae View MSA
122793338 5272 Eudicot View MSA
122042133 5273 Angiosperm View MSA
121349082 5274 Embryophyte View MSA
123381156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain