Gene : Tp57577_TGAC_v2_gene38952 T. pratense v2
Defline:  (1 of 1) PF00560//PF13306//PF13855 - Leucine Rich Repeat (LRR_1) // Leucine rich repeats (6 copies) (LRR_5) // Leucine rich repeat (LRR_8) Genomic Order:  1087
Name:  ? Tp57577_TGAC_v2_gene38952 Secondary Identifier:  ? PAC:35957338
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38952 0.5kb upstream 0.5kb upstream 9555 true Tp57577_TGAC_v2_LG7: 8459693-8469247 Trifolium pratense
Tp57577_TGAC_v2_gene38952 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 8459693-8460192 Trifolium pratense
Tp57577_TGAC_v2_gene38952 0.5kb downstream 0.5kb downstream 9555 true Tp57577_TGAC_v2_LG7: 8460193-8469747 Trifolium pratense
Tp57577_TGAC_v2_gene38952 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 8469248-8469747 Trifolium pratense
Tp57577_TGAC_v2_gene38952 1.0kb upstream 1.0kb upstream 10055 true Tp57577_TGAC_v2_LG7: 8459193-8469247 Trifolium pratense
Tp57577_TGAC_v2_gene38952 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 8459193-8460192 Trifolium pratense
Tp57577_TGAC_v2_gene38952 1.0kb downstream 1.0kb downstream 10055 true Tp57577_TGAC_v2_LG7: 8460193-8470247 Trifolium pratense
Tp57577_TGAC_v2_gene38952 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 8469248-8470247 Trifolium pratense
Tp57577_TGAC_v2_gene38952 2.0kb upstream 2.0kb upstream 11055 true Tp57577_TGAC_v2_LG7: 8458193-8469247 Trifolium pratense
Tp57577_TGAC_v2_gene38952 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 8458193-8460192 Trifolium pratense
Tp57577_TGAC_v2_gene38952 2.0kb downstream 2.0kb downstream 11055 true Tp57577_TGAC_v2_LG7: 8460193-8471247 Trifolium pratense
Tp57577_TGAC_v2_gene38952 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 8469248-8471247 Trifolium pratense
Tp57577_TGAC_v2_gene38952 5.0kb upstream 5.0kb upstream 14055 true Tp57577_TGAC_v2_LG7: 8455193-8469247 Trifolium pratense
Tp57577_TGAC_v2_gene38952 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 8455193-8460192 Trifolium pratense
Tp57577_TGAC_v2_gene38952 5.0kb downstream 5.0kb downstream 14055 true Tp57577_TGAC_v2_LG7: 8460193-8474247 Trifolium pratense
Tp57577_TGAC_v2_gene38952 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 8469248-8474247 Trifolium pratense
Tp57577_TGAC_v2_gene38952 10.0kb upstream 10.0kb upstream 19055 true Tp57577_TGAC_v2_LG7: 8450193-8469247 Trifolium pratense
Tp57577_TGAC_v2_gene38952 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 8450193-8460192 Trifolium pratense
Tp57577_TGAC_v2_gene38952 10.0kb downstream 10.0kb downstream 19055 true Tp57577_TGAC_v2_LG7: 8460193-8479247 Trifolium pratense
Tp57577_TGAC_v2_gene38952 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 8469248-8479247 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307241 5265 Fabidae View MSA
124061452 5270 Rosid View MSA
123738353 5271 Pentapetalae View MSA
122792030 5272 Eudicot View MSA
122042195 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121345842 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain