Gene : Tp57577_TGAC_v2_gene38178 T. pratense v2
Defline:  (1 of 1) PTHR10357:SF110 - PROTEIN T04A8.7, ISOFORM A Genomic Order:  661
Name:  ? Tp57577_TGAC_v2_gene38178 Secondary Identifier:  ? PAC:35955561
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLYCOGENSYNTH-PWY Trifolium pratense pathologic  
Tpratense PWY-622 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38178 0.5kb upstream 0.5kb upstream 8079 true Tp57577_TGAC_v2_LG7: 5010679-5018757 Trifolium pratense
Tp57577_TGAC_v2_gene38178 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 5018258-5018757 Trifolium pratense
Tp57577_TGAC_v2_gene38178 0.5kb downstream 0.5kb downstream 8079 true Tp57577_TGAC_v2_LG7: 5010179-5018257 Trifolium pratense
Tp57577_TGAC_v2_gene38178 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 5010179-5010678 Trifolium pratense
Tp57577_TGAC_v2_gene38178 1.0kb upstream 1.0kb upstream 8579 true Tp57577_TGAC_v2_LG7: 5010679-5019257 Trifolium pratense
Tp57577_TGAC_v2_gene38178 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 5018258-5019257 Trifolium pratense
Tp57577_TGAC_v2_gene38178 1.0kb downstream 1.0kb downstream 8579 true Tp57577_TGAC_v2_LG7: 5009679-5018257 Trifolium pratense
Tp57577_TGAC_v2_gene38178 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 5009679-5010678 Trifolium pratense
Tp57577_TGAC_v2_gene38178 2.0kb upstream 2.0kb upstream 9579 true Tp57577_TGAC_v2_LG7: 5010679-5020257 Trifolium pratense
Tp57577_TGAC_v2_gene38178 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 5018258-5020257 Trifolium pratense
Tp57577_TGAC_v2_gene38178 2.0kb downstream 2.0kb downstream 9579 true Tp57577_TGAC_v2_LG7: 5008679-5018257 Trifolium pratense
Tp57577_TGAC_v2_gene38178 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 5008679-5010678 Trifolium pratense
Tp57577_TGAC_v2_gene38178 5.0kb upstream 5.0kb upstream 12579 true Tp57577_TGAC_v2_LG7: 5010679-5023257 Trifolium pratense
Tp57577_TGAC_v2_gene38178 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 5018258-5023257 Trifolium pratense
Tp57577_TGAC_v2_gene38178 5.0kb downstream 5.0kb downstream 12579 true Tp57577_TGAC_v2_LG7: 5005679-5018257 Trifolium pratense
Tp57577_TGAC_v2_gene38178 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 5005679-5010678 Trifolium pratense
Tp57577_TGAC_v2_gene38178 10.0kb upstream 10.0kb upstream 17579 true Tp57577_TGAC_v2_LG7: 5010679-5028257 Trifolium pratense
Tp57577_TGAC_v2_gene38178 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 5018258-5028257 Trifolium pratense
Tp57577_TGAC_v2_gene38178 10.0kb downstream 10.0kb downstream 17579 true Tp57577_TGAC_v2_LG7: 5000679-5018257 Trifolium pratense
Tp57577_TGAC_v2_gene38178 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 5000679-5010678 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301393 5265 Fabidae View MSA
124069837 5270 Rosid View MSA
123742609 5271 Pentapetalae View MSA
122794740 5272 Eudicot View MSA
122048123 5273 Angiosperm View MSA
121348370 5274 Embryophyte View MSA
123425739 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain