Gene : Tp57577_TGAC_v2_gene38244 T. pratense v2
Defline:  (1 of 1) PTHR23076:SF33 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Genomic Order:  648
Name:  ? Tp57577_TGAC_v2_gene38244 Secondary Identifier:  ? PAC:35956137
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38244 0.5kb upstream 0.5kb upstream 6755 true Tp57577_TGAC_v2_LG7: 4915342-4922096 Trifolium pratense
Tp57577_TGAC_v2_gene38244 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 4915342-4915841 Trifolium pratense
Tp57577_TGAC_v2_gene38244 0.5kb downstream 0.5kb downstream 6755 true Tp57577_TGAC_v2_LG7: 4915842-4922596 Trifolium pratense
Tp57577_TGAC_v2_gene38244 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 4922097-4922596 Trifolium pratense
Tp57577_TGAC_v2_gene38244 1.0kb upstream 1.0kb upstream 7255 true Tp57577_TGAC_v2_LG7: 4914842-4922096 Trifolium pratense
Tp57577_TGAC_v2_gene38244 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 4914842-4915841 Trifolium pratense
Tp57577_TGAC_v2_gene38244 1.0kb downstream 1.0kb downstream 7255 true Tp57577_TGAC_v2_LG7: 4915842-4923096 Trifolium pratense
Tp57577_TGAC_v2_gene38244 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 4922097-4923096 Trifolium pratense
Tp57577_TGAC_v2_gene38244 2.0kb upstream 2.0kb upstream 8255 true Tp57577_TGAC_v2_LG7: 4913842-4922096 Trifolium pratense
Tp57577_TGAC_v2_gene38244 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 4913842-4915841 Trifolium pratense
Tp57577_TGAC_v2_gene38244 2.0kb downstream 2.0kb downstream 8255 true Tp57577_TGAC_v2_LG7: 4915842-4924096 Trifolium pratense
Tp57577_TGAC_v2_gene38244 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 4922097-4924096 Trifolium pratense
Tp57577_TGAC_v2_gene38244 5.0kb upstream 5.0kb upstream 11255 true Tp57577_TGAC_v2_LG7: 4910842-4922096 Trifolium pratense
Tp57577_TGAC_v2_gene38244 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 4910842-4915841 Trifolium pratense
Tp57577_TGAC_v2_gene38244 5.0kb downstream 5.0kb downstream 11255 true Tp57577_TGAC_v2_LG7: 4915842-4927096 Trifolium pratense
Tp57577_TGAC_v2_gene38244 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 4922097-4927096 Trifolium pratense
Tp57577_TGAC_v2_gene38244 10.0kb upstream 10.0kb upstream 16255 true Tp57577_TGAC_v2_LG7: 4905842-4922096 Trifolium pratense
Tp57577_TGAC_v2_gene38244 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 4905842-4915841 Trifolium pratense
Tp57577_TGAC_v2_gene38244 10.0kb downstream 10.0kb downstream 16255 true Tp57577_TGAC_v2_LG7: 4915842-4932096 Trifolium pratense
Tp57577_TGAC_v2_gene38244 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 4922097-4932096 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310077 5265 Fabidae View MSA
124060614 5270 Rosid View MSA
123737451 5271 Pentapetalae View MSA
122792150 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain