Gene : Tp57577_TGAC_v2_gene38245 T. pratense v2
Defline:  (1 of 1) K15452 - tRNA pseudouridine synthase 2 [EC:5.4.99.-] (PUS2) Genomic Order:  622
Name:  ? Tp57577_TGAC_v2_gene38245 Secondary Identifier:  ? PAC:35958286
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38245 0.5kb upstream 0.5kb upstream 5180 true Tp57577_TGAC_v2_LG7: 4753605-4758784 Trifolium pratense
Tp57577_TGAC_v2_gene38245 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 4753605-4754104 Trifolium pratense
Tp57577_TGAC_v2_gene38245 0.5kb downstream 0.5kb downstream 5180 true Tp57577_TGAC_v2_LG7: 4754105-4759284 Trifolium pratense
Tp57577_TGAC_v2_gene38245 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 4758785-4759284 Trifolium pratense
Tp57577_TGAC_v2_gene38245 1.0kb upstream 1.0kb upstream 5680 true Tp57577_TGAC_v2_LG7: 4753105-4758784 Trifolium pratense
Tp57577_TGAC_v2_gene38245 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 4753105-4754104 Trifolium pratense
Tp57577_TGAC_v2_gene38245 1.0kb downstream 1.0kb downstream 5680 true Tp57577_TGAC_v2_LG7: 4754105-4759784 Trifolium pratense
Tp57577_TGAC_v2_gene38245 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 4758785-4759784 Trifolium pratense
Tp57577_TGAC_v2_gene38245 2.0kb upstream 2.0kb upstream 6680 true Tp57577_TGAC_v2_LG7: 4752105-4758784 Trifolium pratense
Tp57577_TGAC_v2_gene38245 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 4752105-4754104 Trifolium pratense
Tp57577_TGAC_v2_gene38245 2.0kb downstream 2.0kb downstream 6680 true Tp57577_TGAC_v2_LG7: 4754105-4760784 Trifolium pratense
Tp57577_TGAC_v2_gene38245 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 4758785-4760784 Trifolium pratense
Tp57577_TGAC_v2_gene38245 5.0kb upstream 5.0kb upstream 9680 true Tp57577_TGAC_v2_LG7: 4749105-4758784 Trifolium pratense
Tp57577_TGAC_v2_gene38245 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 4749105-4754104 Trifolium pratense
Tp57577_TGAC_v2_gene38245 5.0kb downstream 5.0kb downstream 9680 true Tp57577_TGAC_v2_LG7: 4754105-4763784 Trifolium pratense
Tp57577_TGAC_v2_gene38245 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 4758785-4763784 Trifolium pratense
Tp57577_TGAC_v2_gene38245 10.0kb upstream 10.0kb upstream 14680 true Tp57577_TGAC_v2_LG7: 4744105-4758784 Trifolium pratense
Tp57577_TGAC_v2_gene38245 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 4744105-4754104 Trifolium pratense
Tp57577_TGAC_v2_gene38245 10.0kb downstream 10.0kb downstream 14680 true Tp57577_TGAC_v2_LG7: 4754105-4768784 Trifolium pratense
Tp57577_TGAC_v2_gene38245 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 4758785-4768784 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297491 5265 Fabidae View MSA
124067698 5270 Rosid View MSA
123740494 5271 Pentapetalae View MSA
122788913 5272 Eudicot View MSA
122047561 5273 Angiosperm View MSA
121344474 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain