Gene : Tp57577_TGAC_v2_gene38223 T. pratense v2
Defline:  (1 of 2) K17267 - coatomer protein complex, subunit gamma (COPG) Genomic Order:  734
Name:  ? Tp57577_TGAC_v2_gene38223 Secondary Identifier:  ? PAC:35956146
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38223 0.5kb upstream 0.5kb upstream 8933 true Tp57577_TGAC_v2_LG7: 5471958-5480890 Trifolium pratense
Tp57577_TGAC_v2_gene38223 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 5471958-5472457 Trifolium pratense
Tp57577_TGAC_v2_gene38223 0.5kb downstream 0.5kb downstream 8933 true Tp57577_TGAC_v2_LG7: 5472458-5481390 Trifolium pratense
Tp57577_TGAC_v2_gene38223 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 5480891-5481390 Trifolium pratense
Tp57577_TGAC_v2_gene38223 1.0kb upstream 1.0kb upstream 9433 true Tp57577_TGAC_v2_LG7: 5471458-5480890 Trifolium pratense
Tp57577_TGAC_v2_gene38223 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 5471458-5472457 Trifolium pratense
Tp57577_TGAC_v2_gene38223 1.0kb downstream 1.0kb downstream 9433 true Tp57577_TGAC_v2_LG7: 5472458-5481890 Trifolium pratense
Tp57577_TGAC_v2_gene38223 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 5480891-5481890 Trifolium pratense
Tp57577_TGAC_v2_gene38223 2.0kb upstream 2.0kb upstream 10433 true Tp57577_TGAC_v2_LG7: 5470458-5480890 Trifolium pratense
Tp57577_TGAC_v2_gene38223 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 5470458-5472457 Trifolium pratense
Tp57577_TGAC_v2_gene38223 2.0kb downstream 2.0kb downstream 10433 true Tp57577_TGAC_v2_LG7: 5472458-5482890 Trifolium pratense
Tp57577_TGAC_v2_gene38223 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 5480891-5482890 Trifolium pratense
Tp57577_TGAC_v2_gene38223 5.0kb upstream 5.0kb upstream 13433 true Tp57577_TGAC_v2_LG7: 5467458-5480890 Trifolium pratense
Tp57577_TGAC_v2_gene38223 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 5467458-5472457 Trifolium pratense
Tp57577_TGAC_v2_gene38223 5.0kb downstream 5.0kb downstream 13433 true Tp57577_TGAC_v2_LG7: 5472458-5485890 Trifolium pratense
Tp57577_TGAC_v2_gene38223 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 5480891-5485890 Trifolium pratense
Tp57577_TGAC_v2_gene38223 10.0kb upstream 10.0kb upstream 18433 true Tp57577_TGAC_v2_LG7: 5462458-5480890 Trifolium pratense
Tp57577_TGAC_v2_gene38223 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 5462458-5472457 Trifolium pratense
Tp57577_TGAC_v2_gene38223 10.0kb downstream 10.0kb downstream 18433 true Tp57577_TGAC_v2_LG7: 5472458-5490890 Trifolium pratense
Tp57577_TGAC_v2_gene38223 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 5480891-5490890 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313608 5265 Fabidae View MSA
124064996 5270 Rosid View MSA
123745715 5271 Pentapetalae View MSA
122789783 5272 Eudicot View MSA
122043525 5273 Angiosperm View MSA
121350751 5274 Embryophyte View MSA
123428143 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain