Gene : Tp57577_TGAC_v2_gene4190 T. pratense v2
Defline:  (1 of 9) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) Genomic Order:  3113
Name:  ? Tp57577_TGAC_v2_gene4190 Secondary Identifier:  ? PAC:35956274
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4190 0.5kb upstream 0.5kb upstream 8281 true Tp57577_TGAC_v2_LG7: 27826784-27835064 Trifolium pratense
Tp57577_TGAC_v2_gene4190 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 27826784-27827283 Trifolium pratense
Tp57577_TGAC_v2_gene4190 0.5kb downstream 0.5kb downstream 8281 true Tp57577_TGAC_v2_LG7: 27827284-27835564 Trifolium pratense
Tp57577_TGAC_v2_gene4190 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 27835065-27835564 Trifolium pratense
Tp57577_TGAC_v2_gene4190 1.0kb upstream 1.0kb upstream 8781 true Tp57577_TGAC_v2_LG7: 27826284-27835064 Trifolium pratense
Tp57577_TGAC_v2_gene4190 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 27826284-27827283 Trifolium pratense
Tp57577_TGAC_v2_gene4190 1.0kb downstream 1.0kb downstream 8781 true Tp57577_TGAC_v2_LG7: 27827284-27836064 Trifolium pratense
Tp57577_TGAC_v2_gene4190 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 27835065-27836064 Trifolium pratense
Tp57577_TGAC_v2_gene4190 2.0kb upstream 2.0kb upstream 9781 true Tp57577_TGAC_v2_LG7: 27825284-27835064 Trifolium pratense
Tp57577_TGAC_v2_gene4190 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 27825284-27827283 Trifolium pratense
Tp57577_TGAC_v2_gene4190 2.0kb downstream 2.0kb downstream 9781 true Tp57577_TGAC_v2_LG7: 27827284-27837064 Trifolium pratense
Tp57577_TGAC_v2_gene4190 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 27835065-27837064 Trifolium pratense
Tp57577_TGAC_v2_gene4190 5.0kb upstream 5.0kb upstream 12781 true Tp57577_TGAC_v2_LG7: 27822284-27835064 Trifolium pratense
Tp57577_TGAC_v2_gene4190 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 27822284-27827283 Trifolium pratense
Tp57577_TGAC_v2_gene4190 5.0kb downstream 5.0kb downstream 12781 true Tp57577_TGAC_v2_LG7: 27827284-27840064 Trifolium pratense
Tp57577_TGAC_v2_gene4190 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 27835065-27840064 Trifolium pratense
Tp57577_TGAC_v2_gene4190 10.0kb upstream 10.0kb upstream 17781 true Tp57577_TGAC_v2_LG7: 27817284-27835064 Trifolium pratense
Tp57577_TGAC_v2_gene4190 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 27817284-27827283 Trifolium pratense
Tp57577_TGAC_v2_gene4190 10.0kb downstream 10.0kb downstream 17781 true Tp57577_TGAC_v2_LG7: 27827284-27845064 Trifolium pratense
Tp57577_TGAC_v2_gene4190 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 27835065-27845064 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314648 5265 Fabidae View MSA
124067525 5270 Rosid View MSA
123744207 5271 Pentapetalae View MSA
122795649 5272 Eudicot View MSA
122043712 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain