Gene : Tp57577_TGAC_v2_gene6420 T. pratense v2
Defline:  (1 of 1) PTHR24015:SF644 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  3415
Name:  ? Tp57577_TGAC_v2_gene6420 Secondary Identifier:  ? PAC:35957893
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6420 0.5kb upstream 0.5kb upstream 4608 true Tp57577_TGAC_v2_LG7: 30176798-30181405 Trifolium pratense
Tp57577_TGAC_v2_gene6420 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 30180906-30181405 Trifolium pratense
Tp57577_TGAC_v2_gene6420 0.5kb downstream 0.5kb downstream 4608 true Tp57577_TGAC_v2_LG7: 30176298-30180905 Trifolium pratense
Tp57577_TGAC_v2_gene6420 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 30176298-30176797 Trifolium pratense
Tp57577_TGAC_v2_gene6420 1.0kb upstream 1.0kb upstream 5108 true Tp57577_TGAC_v2_LG7: 30176798-30181905 Trifolium pratense
Tp57577_TGAC_v2_gene6420 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 30180906-30181905 Trifolium pratense
Tp57577_TGAC_v2_gene6420 1.0kb downstream 1.0kb downstream 5108 true Tp57577_TGAC_v2_LG7: 30175798-30180905 Trifolium pratense
Tp57577_TGAC_v2_gene6420 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 30175798-30176797 Trifolium pratense
Tp57577_TGAC_v2_gene6420 2.0kb upstream 2.0kb upstream 6108 true Tp57577_TGAC_v2_LG7: 30176798-30182905 Trifolium pratense
Tp57577_TGAC_v2_gene6420 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 30180906-30182905 Trifolium pratense
Tp57577_TGAC_v2_gene6420 2.0kb downstream 2.0kb downstream 6108 true Tp57577_TGAC_v2_LG7: 30174798-30180905 Trifolium pratense
Tp57577_TGAC_v2_gene6420 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 30174798-30176797 Trifolium pratense
Tp57577_TGAC_v2_gene6420 5.0kb upstream 5.0kb upstream 9108 true Tp57577_TGAC_v2_LG7: 30176798-30185905 Trifolium pratense
Tp57577_TGAC_v2_gene6420 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 30180906-30185905 Trifolium pratense
Tp57577_TGAC_v2_gene6420 5.0kb downstream 5.0kb downstream 9108 true Tp57577_TGAC_v2_LG7: 30171798-30180905 Trifolium pratense
Tp57577_TGAC_v2_gene6420 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 30171798-30176797 Trifolium pratense
Tp57577_TGAC_v2_gene6420 10.0kb upstream 10.0kb upstream 14108 true Tp57577_TGAC_v2_LG7: 30176798-30190905 Trifolium pratense
Tp57577_TGAC_v2_gene6420 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 30180906-30190905 Trifolium pratense
Tp57577_TGAC_v2_gene6420 10.0kb downstream 10.0kb downstream 14108 true Tp57577_TGAC_v2_LG7: 30166798-30180905 Trifolium pratense
Tp57577_TGAC_v2_gene6420 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 30166798-30176797 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313688 5265 Fabidae View MSA
124071698 5270 Rosid View MSA
123743334 5271 Pentapetalae View MSA
122796848 5272 Eudicot View MSA
122049142 5273 Angiosperm View MSA
121311265 5274 Embryophyte View MSA
123348580 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain