Gene : Tp57577_TGAC_v2_gene39006 T. pratense v2
Defline:  (1 of 3) PTHR32219:SF2 - PROTON PUMP-INTERACTOR 1-RELATED Genomic Order:  1048
Name:  ? Tp57577_TGAC_v2_gene39006 Secondary Identifier:  ? PAC:35955588
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene39006 0.5kb upstream 0.5kb upstream 5868 true Tp57577_TGAC_v2_LG7: 8148371-8154238 Trifolium pratense
Tp57577_TGAC_v2_gene39006 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 8153739-8154238 Trifolium pratense
Tp57577_TGAC_v2_gene39006 0.5kb downstream 0.5kb downstream 5868 true Tp57577_TGAC_v2_LG7: 8147871-8153738 Trifolium pratense
Tp57577_TGAC_v2_gene39006 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 8147871-8148370 Trifolium pratense
Tp57577_TGAC_v2_gene39006 1.0kb upstream 1.0kb upstream 6368 true Tp57577_TGAC_v2_LG7: 8148371-8154738 Trifolium pratense
Tp57577_TGAC_v2_gene39006 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 8153739-8154738 Trifolium pratense
Tp57577_TGAC_v2_gene39006 1.0kb downstream 1.0kb downstream 6368 true Tp57577_TGAC_v2_LG7: 8147371-8153738 Trifolium pratense
Tp57577_TGAC_v2_gene39006 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 8147371-8148370 Trifolium pratense
Tp57577_TGAC_v2_gene39006 2.0kb upstream 2.0kb upstream 7368 true Tp57577_TGAC_v2_LG7: 8148371-8155738 Trifolium pratense
Tp57577_TGAC_v2_gene39006 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 8153739-8155738 Trifolium pratense
Tp57577_TGAC_v2_gene39006 2.0kb downstream 2.0kb downstream 7368 true Tp57577_TGAC_v2_LG7: 8146371-8153738 Trifolium pratense
Tp57577_TGAC_v2_gene39006 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 8146371-8148370 Trifolium pratense
Tp57577_TGAC_v2_gene39006 5.0kb upstream 5.0kb upstream 10368 true Tp57577_TGAC_v2_LG7: 8148371-8158738 Trifolium pratense
Tp57577_TGAC_v2_gene39006 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 8153739-8158738 Trifolium pratense
Tp57577_TGAC_v2_gene39006 5.0kb downstream 5.0kb downstream 10368 true Tp57577_TGAC_v2_LG7: 8143371-8153738 Trifolium pratense
Tp57577_TGAC_v2_gene39006 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 8143371-8148370 Trifolium pratense
Tp57577_TGAC_v2_gene39006 10.0kb upstream 10.0kb upstream 15368 true Tp57577_TGAC_v2_LG7: 8148371-8163738 Trifolium pratense
Tp57577_TGAC_v2_gene39006 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 8153739-8163738 Trifolium pratense
Tp57577_TGAC_v2_gene39006 10.0kb downstream 10.0kb downstream 15368 true Tp57577_TGAC_v2_LG7: 8138371-8153738 Trifolium pratense
Tp57577_TGAC_v2_gene39006 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 8138371-8148370 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304344 5265 Fabidae View MSA
124070239 5270 Rosid View MSA
123743643 5271 Pentapetalae View MSA
122791245 5272 Eudicot View MSA
122042021 5273 Angiosperm View MSA
121350876 5274 Embryophyte View MSA
123428188 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain