Gene : Tp57577_TGAC_v2_gene39001 T. pratense v2
Defline:  (1 of 1) PTHR31008:SF4 - COP1-INTERACTING PROTEIN 7 (CIP7) Genomic Order:  1095
Name:  ? Tp57577_TGAC_v2_gene39001 Secondary Identifier:  ? PAC:35957288
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene39001 0.5kb upstream 0.5kb upstream 5750 true Tp57577_TGAC_v2_LG7: 8591443-8597192 Trifolium pratense
Tp57577_TGAC_v2_gene39001 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 8596693-8597192 Trifolium pratense
Tp57577_TGAC_v2_gene39001 0.5kb downstream 0.5kb downstream 5750 true Tp57577_TGAC_v2_LG7: 8590943-8596692 Trifolium pratense
Tp57577_TGAC_v2_gene39001 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 8590943-8591442 Trifolium pratense
Tp57577_TGAC_v2_gene39001 1.0kb upstream 1.0kb upstream 6250 true Tp57577_TGAC_v2_LG7: 8591443-8597692 Trifolium pratense
Tp57577_TGAC_v2_gene39001 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 8596693-8597692 Trifolium pratense
Tp57577_TGAC_v2_gene39001 1.0kb downstream 1.0kb downstream 6250 true Tp57577_TGAC_v2_LG7: 8590443-8596692 Trifolium pratense
Tp57577_TGAC_v2_gene39001 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 8590443-8591442 Trifolium pratense
Tp57577_TGAC_v2_gene39001 2.0kb upstream 2.0kb upstream 7250 true Tp57577_TGAC_v2_LG7: 8591443-8598692 Trifolium pratense
Tp57577_TGAC_v2_gene39001 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 8596693-8598692 Trifolium pratense
Tp57577_TGAC_v2_gene39001 2.0kb downstream 2.0kb downstream 7250 true Tp57577_TGAC_v2_LG7: 8589443-8596692 Trifolium pratense
Tp57577_TGAC_v2_gene39001 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 8589443-8591442 Trifolium pratense
Tp57577_TGAC_v2_gene39001 5.0kb upstream 5.0kb upstream 10250 true Tp57577_TGAC_v2_LG7: 8591443-8601692 Trifolium pratense
Tp57577_TGAC_v2_gene39001 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 8596693-8601692 Trifolium pratense
Tp57577_TGAC_v2_gene39001 5.0kb downstream 5.0kb downstream 10250 true Tp57577_TGAC_v2_LG7: 8586443-8596692 Trifolium pratense
Tp57577_TGAC_v2_gene39001 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 8586443-8591442 Trifolium pratense
Tp57577_TGAC_v2_gene39001 10.0kb upstream 10.0kb upstream 15250 true Tp57577_TGAC_v2_LG7: 8591443-8606692 Trifolium pratense
Tp57577_TGAC_v2_gene39001 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 8596693-8606692 Trifolium pratense
Tp57577_TGAC_v2_gene39001 10.0kb downstream 10.0kb downstream 15250 true Tp57577_TGAC_v2_LG7: 8581443-8596692 Trifolium pratense
Tp57577_TGAC_v2_gene39001 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 8581443-8591442 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302091 5265 Fabidae View MSA
124068447 5270 Rosid View MSA
123751203 5271 Pentapetalae View MSA
122797098 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain