Gene : Tp57577_TGAC_v2_gene6823 T. pratense v2
Defline:  (1 of 106) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Genomic Order:  2890
Name:  ? Tp57577_TGAC_v2_gene6823 Secondary Identifier:  ? PAC:35956263
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6823 0.5kb upstream 0.5kb upstream 10835 true Tp57577_TGAC_v2_LG7: 25694741-25705575 Trifolium pratense
Tp57577_TGAC_v2_gene6823 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 25705076-25705575 Trifolium pratense
Tp57577_TGAC_v2_gene6823 0.5kb downstream 0.5kb downstream 10835 true Tp57577_TGAC_v2_LG7: 25694241-25705075 Trifolium pratense
Tp57577_TGAC_v2_gene6823 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 25694241-25694740 Trifolium pratense
Tp57577_TGAC_v2_gene6823 1.0kb upstream 1.0kb upstream 11335 true Tp57577_TGAC_v2_LG7: 25694741-25706075 Trifolium pratense
Tp57577_TGAC_v2_gene6823 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 25705076-25706075 Trifolium pratense
Tp57577_TGAC_v2_gene6823 1.0kb downstream 1.0kb downstream 11335 true Tp57577_TGAC_v2_LG7: 25693741-25705075 Trifolium pratense
Tp57577_TGAC_v2_gene6823 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 25693741-25694740 Trifolium pratense
Tp57577_TGAC_v2_gene6823 2.0kb upstream 2.0kb upstream 12335 true Tp57577_TGAC_v2_LG7: 25694741-25707075 Trifolium pratense
Tp57577_TGAC_v2_gene6823 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 25705076-25707075 Trifolium pratense
Tp57577_TGAC_v2_gene6823 2.0kb downstream 2.0kb downstream 12335 true Tp57577_TGAC_v2_LG7: 25692741-25705075 Trifolium pratense
Tp57577_TGAC_v2_gene6823 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 25692741-25694740 Trifolium pratense
Tp57577_TGAC_v2_gene6823 5.0kb upstream 5.0kb upstream 15335 true Tp57577_TGAC_v2_LG7: 25694741-25710075 Trifolium pratense
Tp57577_TGAC_v2_gene6823 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 25705076-25710075 Trifolium pratense
Tp57577_TGAC_v2_gene6823 5.0kb downstream 5.0kb downstream 15335 true Tp57577_TGAC_v2_LG7: 25689741-25705075 Trifolium pratense
Tp57577_TGAC_v2_gene6823 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 25689741-25694740 Trifolium pratense
Tp57577_TGAC_v2_gene6823 10.0kb upstream 10.0kb upstream 20335 true Tp57577_TGAC_v2_LG7: 25694741-25715075 Trifolium pratense
Tp57577_TGAC_v2_gene6823 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 25705076-25715075 Trifolium pratense
Tp57577_TGAC_v2_gene6823 10.0kb downstream 10.0kb downstream 20335 true Tp57577_TGAC_v2_LG7: 25684741-25705075 Trifolium pratense
Tp57577_TGAC_v2_gene6823 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 25684741-25694740 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029860 5273 Angiosperm View MSA
122314921 5265 Fabidae View MSA
124071412 5270 Rosid View MSA
123753670 5271 Pentapetalae View MSA
122775191 5272 Eudicot View MSA
121350456 5274 Embryophyte View MSA
123381742 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain