Gene : Tp57577_TGAC_v2_gene6839 T. pratense v2
Defline:  (1 of 1) K05356 - all-trans-nonaprenyl-diphosphate synthase (SPS, sds) Genomic Order:  2812
Name:  ? Tp57577_TGAC_v2_gene6839 Secondary Identifier:  ? PAC:35956602
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6520 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6839 0.5kb upstream 0.5kb upstream 7404 true Tp57577_TGAC_v2_LG7: 25107757-25115160 Trifolium pratense
Tp57577_TGAC_v2_gene6839 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 25107757-25108256 Trifolium pratense
Tp57577_TGAC_v2_gene6839 0.5kb downstream 0.5kb downstream 7404 true Tp57577_TGAC_v2_LG7: 25108257-25115660 Trifolium pratense
Tp57577_TGAC_v2_gene6839 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 25115161-25115660 Trifolium pratense
Tp57577_TGAC_v2_gene6839 1.0kb upstream 1.0kb upstream 7904 true Tp57577_TGAC_v2_LG7: 25107257-25115160 Trifolium pratense
Tp57577_TGAC_v2_gene6839 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 25107257-25108256 Trifolium pratense
Tp57577_TGAC_v2_gene6839 1.0kb downstream 1.0kb downstream 7904 true Tp57577_TGAC_v2_LG7: 25108257-25116160 Trifolium pratense
Tp57577_TGAC_v2_gene6839 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 25115161-25116160 Trifolium pratense
Tp57577_TGAC_v2_gene6839 2.0kb upstream 2.0kb upstream 8904 true Tp57577_TGAC_v2_LG7: 25106257-25115160 Trifolium pratense
Tp57577_TGAC_v2_gene6839 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 25106257-25108256 Trifolium pratense
Tp57577_TGAC_v2_gene6839 2.0kb downstream 2.0kb downstream 8904 true Tp57577_TGAC_v2_LG7: 25108257-25117160 Trifolium pratense
Tp57577_TGAC_v2_gene6839 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 25115161-25117160 Trifolium pratense
Tp57577_TGAC_v2_gene6839 5.0kb upstream 5.0kb upstream 11904 true Tp57577_TGAC_v2_LG7: 25103257-25115160 Trifolium pratense
Tp57577_TGAC_v2_gene6839 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 25103257-25108256 Trifolium pratense
Tp57577_TGAC_v2_gene6839 5.0kb downstream 5.0kb downstream 11904 true Tp57577_TGAC_v2_LG7: 25108257-25120160 Trifolium pratense
Tp57577_TGAC_v2_gene6839 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 25115161-25120160 Trifolium pratense
Tp57577_TGAC_v2_gene6839 10.0kb upstream 10.0kb upstream 16904 true Tp57577_TGAC_v2_LG7: 25098257-25115160 Trifolium pratense
Tp57577_TGAC_v2_gene6839 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 25098257-25108256 Trifolium pratense
Tp57577_TGAC_v2_gene6839 10.0kb downstream 10.0kb downstream 16904 true Tp57577_TGAC_v2_LG7: 25108257-25125160 Trifolium pratense
Tp57577_TGAC_v2_gene6839 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 25115161-25125160 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041065 5273 Angiosperm View MSA
122299175 5265 Fabidae View MSA
124065347 5270 Rosid View MSA
123746184 5271 Pentapetalae View MSA
122791358 5272 Eudicot View MSA
121345449 5274 Embryophyte View MSA
123424009 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain