Gene : Tp57577_TGAC_v2_gene8538 T. pratense v2

Defline:  (1 of 1) K03950 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6 (NDUFA6) Genomic Order:  2980
Name:  ? Tp57577_TGAC_v2_gene8538 Secondary Identifier:  ? PAC:35958300

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene8538 0.5kb upstream 0.5kb upstream 5052 true Tp57577_TGAC_v2_LG7: 26643273-26648324 Trifolium pratense
Tp57577_TGAC_v2_gene8538 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 26647825-26648324 Trifolium pratense
Tp57577_TGAC_v2_gene8538 0.5kb downstream 0.5kb downstream 5052 true Tp57577_TGAC_v2_LG7: 26642773-26647824 Trifolium pratense
Tp57577_TGAC_v2_gene8538 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 26642773-26643272 Trifolium pratense
Tp57577_TGAC_v2_gene8538 1.0kb upstream 1.0kb upstream 5552 true Tp57577_TGAC_v2_LG7: 26643273-26648824 Trifolium pratense
Tp57577_TGAC_v2_gene8538 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 26647825-26648824 Trifolium pratense
Tp57577_TGAC_v2_gene8538 1.0kb downstream 1.0kb downstream 5552 true Tp57577_TGAC_v2_LG7: 26642273-26647824 Trifolium pratense
Tp57577_TGAC_v2_gene8538 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 26642273-26643272 Trifolium pratense
Tp57577_TGAC_v2_gene8538 2.0kb upstream 2.0kb upstream 6552 true Tp57577_TGAC_v2_LG7: 26643273-26649824 Trifolium pratense
Tp57577_TGAC_v2_gene8538 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 26647825-26649824 Trifolium pratense
Tp57577_TGAC_v2_gene8538 2.0kb downstream 2.0kb downstream 6552 true Tp57577_TGAC_v2_LG7: 26641273-26647824 Trifolium pratense
Tp57577_TGAC_v2_gene8538 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 26641273-26643272 Trifolium pratense
Tp57577_TGAC_v2_gene8538 5.0kb upstream 5.0kb upstream 9552 true Tp57577_TGAC_v2_LG7: 26643273-26652824 Trifolium pratense
Tp57577_TGAC_v2_gene8538 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 26647825-26652824 Trifolium pratense
Tp57577_TGAC_v2_gene8538 5.0kb downstream 5.0kb downstream 9552 true Tp57577_TGAC_v2_LG7: 26638273-26647824 Trifolium pratense
Tp57577_TGAC_v2_gene8538 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 26638273-26643272 Trifolium pratense
Tp57577_TGAC_v2_gene8538 10.0kb upstream 10.0kb upstream 14552 true Tp57577_TGAC_v2_LG7: 26643273-26657824 Trifolium pratense
Tp57577_TGAC_v2_gene8538 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 26647825-26657824 Trifolium pratense
Tp57577_TGAC_v2_gene8538 10.0kb downstream 10.0kb downstream 14552 true Tp57577_TGAC_v2_LG7: 26633273-26647824 Trifolium pratense
Tp57577_TGAC_v2_gene8538 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 26633273-26643272 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041345 5273 Angiosperm View MSA
122312184 5265 Fabidae View MSA
124060660 5270 Rosid View MSA
123740725 5271 Pentapetalae View MSA
122787479 5272 Eudicot View MSA
121345950 5274 Embryophyte View MSA
123424820 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain